RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ORC5O43913 435 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 MT-CYBP00156 380 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 IFNA7P01567 189 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 STAG3L1P0CL83 205 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 KELP23276 732 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 TPMTP51580 245 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 SUOXP51687 545 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 PITX1P78337 314 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 FOXD4Q12950 439 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 GRIK4Q16099 956 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 CELF3Q5SZQ8 465 aaKnown RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 ANKRD54Q6NXT1 300 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 DGLUCYQ7Z3D6 616 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 GALNT10Q86SR1 603 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 RASGRP3Q8IV61 690 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 TAGAPQ8N103 731 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 RYBPQ8N488 228 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 CHTF18Q8WVB6 975 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 ST8SIA4Q92187 359 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 RBPMSQ93062 196 aaKnown RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 WNT8BQ93098 351 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 KLHL15Q96M94 604 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 TEPSINQ96N21 525 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 MGLLQ99685 303 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 CDCA4Q9BXL8 241 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 GLIS2Q9BZE0 524 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 GLOD4Q9HC38 313 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 RGS18Q9NS28 235 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 CUEDC1Q9NWM3 386 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 GLS2Q9UI32 602 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 ZNF490Q9ULM2 529 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 ING4Q9UNL4 249 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 LTBP4Q8N2S1 1624 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 M0QYT0 321 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 B3GALNT1O75752 331 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 S1PR4O95977 384 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 G6PDP11413 515 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 ARSBP15848 533 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 F8A1P23610 371 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 BMP8BP34820 402 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 GPC1P35052 558 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 CRISP3P54108 245 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 SEMA3AQ14563 771 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 ZNF273Q14593 569 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 POU4F3Q15319 338 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 HABP4Q5JVS0 413 aaKnown RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 BMP8AQ7Z5Y6 402 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 UNC93AQ86WB7 457 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 CIDECQ96AQ7 238 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 B3GALT6Q96L58 329 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 RPRD1AQ96P16 312 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 QRFPRQ96P65 431 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 ZBTB18Q99592 522 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 MYOCQ99972 504 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 USB1Q9BQ65 265 aaKnown RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 MARVELD1Q9BSK0 173 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 MCOLN1Q9GZU1 580 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 PIGUQ9H490 435 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 RANBP3Q9H6Z4 567 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-206ENST00000428313 CCSER2Q9H7U1 834 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 HEXA-AS1Q9H8Q6 139 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 IFT46Q9NQC8 304 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 TMLHEQ9NVH6 421 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 GPR83Q9NYM4 423 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 TAS2R7Q9NYW3 318 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 NUP205Q92621 2012 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 SYNJ2BP-COX16A0A087WUM0 186 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 FABP12A6NFH5 140 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 SUPT3HB4E1H0 165 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 B4GALT5O43286 388 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 LGI1O95970 557 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 PGRP06401 933 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 FAM157BP0CG42 384 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 COL6A1P12109 1028 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 GZMMP51124 257 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 CLCNKAP51800 687 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 ST3GAL4Q11206 333 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 COL19A1Q14993 1142 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 FKBP1CQ5VVH2 108 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 SCIMPQ6UWF3 145 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 Q6ZSR9 355 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 DDX53Q86TM3 631 aaKnown RBP15.63■□□□□ 0.09
C9orf3-206ENST00000428313 C3orf58Q8NDZ4 430 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 ZNF431Q8TF32 576 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-206ENST00000428313 FAM149B1Q96BN6 582 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 MSLNLQ96KJ4 702 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 SORCS2Q96PQ0 1159 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 HTATIP2Q9BUP3 242 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 CNPPD1Q9BV87 410 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 ZNF277Q9NRM2 450 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-206ENST00000428313 SLC25A37Q9NYZ2 338 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 COX16Q9P0S2 106 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 ZNF225Q9UK10 706 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 SCML1Q9UN30 329 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 TRBV5-3A0A0A0MS03 114 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 TUBAL3A6NHL2 446 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 WASH4PA8MWX3 477 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 PITPNM1O00562 1244 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 EVI2BP34910 448 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 CSTF3Q12996 717 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms