RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 SLC22A8Q8TCC7 542 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 THAP3Q8WTV1 239 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 PLEKHG4BQ96PX9 1271 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 GORASP1Q9BQQ3 440 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 KCNK13Q9HB14 408 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 HHATLQ9HCP6 504 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 PNPOQ9NVS9 261 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 DNAJB4Q9UDY4 337 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 TMPRSS11EQ9UL52 423 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 PCDHGA2Q9Y5H1 932 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 PARP4Q9UKK3 1724 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 CCDC162PA2VCL2 907 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 OR6C74A6NCV1 312 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 LEFTY1O75610 366 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 SEMA3DO95025 777 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 KCNE1P15382 129 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 EIF1AXP47813 144 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 RNASE12Q5GAN4 147 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 SYPL2Q5VXT5 272 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 NXPE1Q8N323 547 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 CHCHD4Q8N4Q1 142 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 TUBGCP5Q96RT8 1024 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 RBCK1Q9BYM8 510 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 SMOC2Q9H3U7 446 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 TCF7L1Q9HCS4 588 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 ENY2Q9NPA8 101 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 SLAMF7Q9NQ25 335 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 ACSS2Q9NR19 701 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 PPP4R1LQ9P1A2 415 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 SH3BGRL2Q9UJC5 107 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 HS3ST4Q9Y661 456 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 KDELR3O43731 214 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 RFPL2O75678 378 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 PIM3Q86V86 326 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 CAMK1GQ96NX5 476 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 CTPS2Q9NRF8 586 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 P2RX2Q9UBL9 471 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 PRODH2Q9UF12 536 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 MAFFQ9ULX9 164 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 A6NL46 340 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 BTN3A3O00478 584 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 PGLSO95336 258 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 KLK1P06870 262 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 THEGLP0DJG4 465 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 DRD1P21728 446 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 ARG2P78540 354 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 DSC1Q08554 894 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 RAET1LQ5VY80 246 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 TMEM198Q66K66 360 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 TMEM225Q6GV28 225 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 GK5Q6ZS86 529 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 UBQLNLQ8IYU4 475 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 PWWP2AQ96N64 755 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 OR1F2PQ96R84 312 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 CCNL2Q96S94 520 aaPredicted RBP9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 NPAS2Q99743 824 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 GAL3ST1Q99999 423 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 CPEB1Q9BZB8 566 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 PEAK1Q9H792 1746 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 ASB6Q9NWX5 421 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 FNIP2Q9P278 1114 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 BACE2Q9Y5Z0 518 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 TEX46H3BTG2 121 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 TNFRSF21O75509 655 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 OR3A3P47888 321 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 OR3A2P47893 321 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 STARP49675 285 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 LIMK2P53671 638 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 LSM3P62310 102 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 NFKB2Q00653 900 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 DPY19L1Q2PZI1 675 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 IFI44LQ53G44 452 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 SPIN4Q56A73 249 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 GALNT5Q7Z7M9 940 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 RBM12BQ8IXT5 1001 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 FUKQ8N0W3 1084 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 C7orf57Q8NEG2 295 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 OR5L2Q8NGL0 311 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 TMEM234Q8WY98 164 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 DAZLQ92904 295 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 ESAMQ96AP7 390 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 RBP7Q96R05 134 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 SDCBP2Q9H190 292 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 ZNF222Q9UK12 451 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 LOC110117498-PIK3R3F6TDL0 507 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 HSPA12AO43301 675 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 ABCB7O75027 752 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 CDC123O75794 336 aaPredicted RBP9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 SERPINA6P08185 405 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 MAP3K8P41279 467 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 VIPR2P41587 438 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 LIPEQ05469 1076 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 ATP1A4Q13733 1029 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 DHCR24Q15392 516 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 SWI5Q1ZZU3 235 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 KIAA0895LQ68EN5 471 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 KIAA0930Q6ICG6 404 aaPredicted RBP9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 ZYG11AQ6WRX3 759 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 LRRC70Q7Z2Q7 622 aa9.69□□□□□ -0.86
CLTCL1-202ENST00000427926 PIK3R3Q92569 461 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms