RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 GHDCQ8N2G8 530 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 FTMTQ8N4E7 242 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 KCTD4Q8WVF5 259 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 ZNF285Q96NJ3 590 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 OR1F2PQ96R84 312 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 DGCR6LQ9BY27 220 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 SEMA6BQ9H3T3 888 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 CCDC86Q9H6F5 360 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 PLEKHA6Q9Y2H5 1048 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 VWA7Q9Y334 891 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 PMF1-BGLAPU3KQ54 211 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 SMIM28A0A1B0GU29 152 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 CPSF4LA6NMK7 179 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 ZNF670-ZNF695F2Z2N8 137 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 M0R3H8 397 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 NPC1O15118 1278 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 CBFA2T3O75081 653 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 PDE5AO76074 875 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 IFNW1P05000 195 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 SRCP12931 536 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 PITPNAQ00169 270 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 FAAP100Q0VG06 881 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 CYP27C1Q4G0S4 372 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 SPDYCQ5MJ68 293 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 ARHGAP36Q6ZRI8 547 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 ARCQ7LC44 396 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 TMPRSS9Q7Z410 1059 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 CMTR2Q8IYT2 770 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 CRYBG2Q8N1P7 616 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 CNTD1Q8N815 330 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 TMEM161BQ8NDZ6 487 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 BHLHE22Q8NFJ8 381 aaPredicted RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 GDPD5Q8WTR4 605 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 TRIB2Q92519 343 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 MMABQ96EY8 250 aaPredicted RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 ZIM3Q96PE6 472 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 EBF3Q9H4W6 596 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 PRODH2Q9UF12 536 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 CORO1CQ9ULV4 474 aaPredicted RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 PCDHGA2Q9Y5H1 932 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 TLL2Q9Y6L7 1015 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 SQORQ9Y6N5 450 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 DLC1Q96QB1 1528 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 METTL21EPA6NDL7 271 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 KCNU1A8MYU2 1149 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 APBB3O95704 486 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 CLPTM1O96005 669 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 FABP3P05413 133 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 CSNK2A2P19784 350 aaPredicted RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 IL12AP29459 219 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 GRK5P34947 590 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 KIR3DL1P43629 444 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 FASLGP48023 281 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 CLCNKAP51800 687 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 AFF3P51826 1226 aaKnown RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 CRISP3P54108 245 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ANTXR2P58335 489 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 TATDN1Q6P1N9 297 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 PDSS2Q86YH6 399 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 SLC44A3Q8N4M1 653 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ZNF610Q8N9Z0 462 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ZBTB8BQ8NAP8 495 aaPredicted RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 SNIP1Q8TAD8 396 aaKnown RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 NDNFQ8TB73 568 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 PNPT1Q8TCS8 783 aaKnown RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 OXNAD1Q96HP4 312 aaPredicted RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 MARK4Q96L34 752 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 CCDC115Q96NT0 180 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 RC3H2Q9HBD1 1191 aaKnown RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 ABCB9Q9NP78 766 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 SPAG4Q9NPE6 437 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 EGFL7Q9UHF1 273 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 L1RE1Q9UN81 338 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 MAN2B2Q9Y2E5 1009 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 NRXN1Q9ULB1 1477 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 C17orf113A0A1B0GUU1 675 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 IQCF5A8MTL0 148 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 MATN2O00339 956 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 B4GALT5O43286 388 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 TGM5O43548 720 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 MTX2O75431 263 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ITGA10O75578 1167 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 TBX18O95935 607 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 PRKCHP24723 683 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 RPL10P27635 214 aaKnown RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 GPR85P60893 370 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 PRKCDQ05655 676 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 CHIT1Q13231 466 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 IGSF11Q5DX21 431 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 KBTBD6Q86V97 674 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ZNF101Q8IZC7 436 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 AMER2Q8N7J2 671 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 OR6K6Q8NGW6 343 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 UCN3Q969E3 161 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 LENG1Q96BZ8 264 aaPredicted RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 RAB39BQ96DA2 213 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 CMTM7Q96FZ5 175 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 PPM1MQ96MI6 270 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 CDRT15Q96T59 188 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 DUSP23Q9BVJ7 150 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms