RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 KIAA0513O60268 411 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 DLX3O60479 287 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRAF2O60831 178 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 GDF11O95390 407 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 AP2A1O95782 977 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 MLYCDO95822 493 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 CNPP09543 421 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ACSM4P0C7M7 580 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF806P0C7X5 589 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ODC1P11926 461 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PIPP12273 146 aaPredicted RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 CD1EP15812 388 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 VAMP1P23763 118 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 MGAT1P26572 445 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 MAPK3P27361 379 aaPredicted RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 LCN1P31025 176 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 YWHABP31946 246 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 DCTP40126 519 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PXNP49023 591 aaPredicted RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF81P51508 661 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 NR0B1P51843 470 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 POLR2JP52435 117 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 CACNB3P54284 484 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 CD81P60033 236 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 CDC42P60953 191 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 RAB5BP61020 215 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 HERVK_113P63132 956 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ERVK-8P63133 956 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 OGDHQ02218 1023 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 EXOSC2Q13868 293 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 KCNAB1Q14722 419 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 NCF4Q15080 339 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PGM5Q15124 567 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF124Q15973 351 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF284Q2VY69 593 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 C4orf46Q504U0 113 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PABPC1L2AQ5JQF8 200 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PPM1JQ5JR12 505 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 TREML2Q5T2D2 321 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 C10orf62Q5T681 223 aaPredicted RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 SH3PXD2AQ5TCZ1 1133 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 MEDAGQ5VYS4 303 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR7E24Q6IFN5 339 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 BHLHB9Q6PI77 547 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 C5orf46Q6UWT4 87 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 KIAA1324Q6UXG2 1013 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 HTR3DQ70Z44 454 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 KCTD1Q719H9 257 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 AHSA2Q719I0 299 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 UTS2BQ765I0 119 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 GPR155Q7Z3F1 870 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 CMC1Q7Z7K0 106 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 JAZF1Q86VZ6 243 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 IFNEQ86WN2 208 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 MCATQ8IVS2 390 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 CNTN4Q8IWV2 1026 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ADGRF3Q8IZF5 1079 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ABI1Q8IZP0 508 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 NLGN4XQ8N0W4 816 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PGBD3Q8N328 593 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 CPA6Q8N4T0 437 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 TAB3Q8N5C8 712 aaPredicted RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 C12orf45Q8N5I9 185 aaPredicted RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 CAMKK1Q8N5S9 505 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 RTL3Q8N8U3 475 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 C12orf29Q8N999 325 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 COLGALT1Q8NBJ5 622 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 MTMR14Q8NCE2 650 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ARRDC4Q8NCT1 418 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM161BQ8NDZ6 487 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PPHLN1Q8NEY8 458 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR4M2Q8NGB6 313 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR6M1Q8NGM8 313 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR2T11Q8NH01 316 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR52N1Q8NH53 320 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 GPR151Q8TDV0 419 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ASB12Q8WXK4 309 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 KAT2AQ92830 837 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 RHBDF1Q96CC6 855 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 REPS1Q96D71 796 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 DYNLL2Q96FJ2 89 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 DIRAS2Q96HU8 199 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM41AQ96HV5 264 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM84BQ96KN1 310 aaPredicted RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 QRFPRQ96P65 431 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 SORCS2Q96PQ0 1159 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 YIPF4Q9BSR8 244 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 CDCA4Q9BXL8 241 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ERVK-6Q9BXR3 956 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 MRPL4Q9BYD3 311 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 BRINP2Q9C0B6 783 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 AMBRA1Q9C0C7 1298 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 TTYH1Q9H313 450 aaPredicted RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR51M1Q9H341 326 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 KLHL31Q9H511 634 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC28A3Q9HAS3 691 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 POPDC3Q9HBV1 291 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 MCCC2Q9HCC0 563 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PDGFCQ9NRA1 345 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ABCB8Q9NUT2 735 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms