RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 FASTKD1Q53R41 847 aaKnown RBP13.91□□□□□ -0.18
PDAP1-202ENST00000426447 FBXO42Q6P3S6 717 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 RNF44Q7L0R7 432 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 DNAAF3Q8N9W5 541 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 OR6P1Q8NGX9 317 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 MVB12AQ96EY5 273 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 ZNF354BQ96LW1 612 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 C10orf90Q96M02 699 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 OSBPL8Q9BZF1 889 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 KLHL1Q9NR64 748 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 ANAPC5Q9UJX4 755 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 NPIPA1Q9UND3 350 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 EFR3BQ9Y2G0 817 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 ZNF835Q9Y2P0 537 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 MRFAP1Q9Y605 127 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 CCDC168Q8NDH2 2452 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 LOC102723996A0A087X1L8 192 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 ZNF189O75820 626 aaPredicted RBP13.9□□□□□ -0.18
PDAP1-202ENST00000426447 METTL18O95568 372 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 PTMAP06454 111 aaKnown RBP13.9□□□□□ -0.18
PDAP1-202ENST00000426447 C8orf89P0DMQ9 161 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 EEF1DP29692 281 aaKnown RBP13.9□□□□□ -0.18
PDAP1-202ENST00000426447 MAGEA1P43355 309 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 EMP3P54852 163 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 HADHBP55084 474 aaKnown RBP13.9□□□□□ -0.18
PDAP1-202ENST00000426447 NAA25Q14CX7 972 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 PRTGQ2VWP7 1150 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 BTBD16Q32M84 506 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 MFSD4BQ5TF39 518 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 LRRC8BQ6P9F7 803 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 AFTPHQ6ULP2 937 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 Q6ZPB1 254 aaPredicted RBP13.9□□□□□ -0.18
PDAP1-202ENST00000426447 NCCRP1Q6ZVX7 275 aaPredicted RBP13.9□□□□□ -0.18
PDAP1-202ENST00000426447 LINC00523Q86TU6 105 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 KLHDC8BQ8IXV7 354 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 KRT222Q8N1A0 295 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 TAB3Q8N5C8 712 aaPredicted RBP13.9□□□□□ -0.18
PDAP1-202ENST00000426447 CSNK1A1LQ8N752 337 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 AMER2Q8N7J2 671 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 OR2A1Q8NGT9 310 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 OR4L1Q8NH43 312 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 IMMP1LQ96LU5 166 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 FOPNLQ96NB1 174 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 DPH7Q9BTV6 452 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 ACAT2Q9BWD1 397 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 TGIF2Q9GZN2 237 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 ENKD1Q9H0I2 346 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 KLK4Q9Y5K2 254 aa13.9□□□□□ -0.18
PDAP1-202ENST00000426447 MED13LQ71F56 2210 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 SYCE3A1L190 88 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 PJA2O43164 708 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 SLCO2B1O94956 709 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 TJP3O95049 919 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 C1orf105O95561 183 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 CD46P15529 392 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 PSMA3P25788 255 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 AOAHP28039 575 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 SLC26A3P40879 764 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 BDKRB1P46663 353 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 ART1P52961 327 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 PRAMEP78395 509 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 SYT16Q17RD7 645 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 P3H1Q32P28 736 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 CCSMST1Q4G0I0 132 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 ACER2Q5QJU3 275 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 FCRLBQ6BAA4 426 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 PTRHD1Q6GMV3 140 aaKnown RBP13.89□□□□□ -0.19
PDAP1-202ENST00000426447 TMEM205Q6UW68 189 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 EID3Q8N140 333 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 BEST3Q8N1M1 668 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 FAM71DQ8N9W8 422 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 FAM98AQ8NCA5 519 aaKnown RBP13.89□□□□□ -0.19
PDAP1-202ENST00000426447 LKAAEAR1Q8TD35 194 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 MAGEC3Q8TD91 643 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 AGAP11Q8TF27 550 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 RERGQ96A58 199 aaPredicted RBP13.89□□□□□ -0.19
PDAP1-202ENST00000426447 SDCCAG3Q96C92 435 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 MRFAP1L1Q96HT8 127 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 UTP23Q9BRU9 249 aaKnown RBP13.89□□□□□ -0.19
PDAP1-202ENST00000426447 ANKRD10Q9NXR5 420 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 COQ3Q9NZJ6 369 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 RUVBL1Q9Y265 456 aaKnown RBP13.89□□□□□ -0.19
PDAP1-202ENST00000426447 PCDHGB6Q9Y5F9 930 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 NFS1Q9Y697 457 aa13.89□□□□□ -0.19
PDAP1-202ENST00000426447 AKAP9Q99996 3911 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 A0A0A6YYC8 382 aaPredicted RBP13.88□□□□□ -0.19
PDAP1-202ENST00000426447 IGHV3-20A0A0C4DH32 117 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 OR2A25A4D2G3 310 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 I3L1I5 382 aaPredicted RBP13.88□□□□□ -0.19
PDAP1-202ENST00000426447 PRRG2O14669 202 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 CBFA2T2O43439 604 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 ASNA1O43681 348 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 SEC24DO94855 1032 aaPredicted RBP13.88□□□□□ -0.19
PDAP1-202ENST00000426447 CD96P40200 585 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 CCNFP41002 786 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 YBX1P67809 324 aaKnown RBP13.88□□□□□ -0.19
PDAP1-202ENST00000426447 OC90Q02509 493 aaPredicted RBP13.88□□□□□ -0.19
PDAP1-202ENST00000426447 TSTA3Q13630 321 aaPredicted RBP13.88□□□□□ -0.19
PDAP1-202ENST00000426447 TUBA3CQ13748 450 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 OR1C1Q15619 314 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms