RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 STATHP02808 62 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 EIF2S1P05198 315 aaKnown RBP13.04□□□□□ -0.32
SNX3-204ENST00000426155 GMPRP36959 345 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 MAGEA4P43358 317 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 CAV1Q03135 178 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 CHAF1BQ13112 559 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 SP140Q13342 867 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 NCF4Q15080 339 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 KBTBD12Q3ZCT8 623 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 ZC3H12BQ5HYM0 836 aaKnown RBP13.04□□□□□ -0.32
SNX3-204ENST00000426155 PRAMEF13Q5VWM6 474 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 CPZQ66K79 652 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 ZNF425Q6IV72 752 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 TLDC1Q6P9B6 456 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 AGTRAPQ6RW13 159 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 C3orf62Q6ZUJ4 267 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 ADCK2Q7Z695 626 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 MMGT1Q8N4V1 131 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 ALKBH8Q96BT7 664 aaKnown RBP13.04□□□□□ -0.32
SNX3-204ENST00000426155 MED8Q96G25 268 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 ZNF285Q96NJ3 590 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 CATSPER2Q96P56 530 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 PLCD4Q9BRC7 762 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 NDC1Q9BTX1 674 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 GPR87Q9BY21 358 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 NLNQ9BYT8 704 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 RHOJQ9H4E5 214 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 PARVBQ9HBI1 364 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 LRRC4CQ9HCJ2 640 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 CCDC177Q9NQR7 707 aaPredicted RBP13.04□□□□□ -0.32
SNX3-204ENST00000426155 SLC22A11Q9NSA0 550 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 CUTCQ9NTM9 273 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 TXLNGQ9NUQ3 528 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 UTP6Q9NYH9 597 aaKnown RBP13.04□□□□□ -0.32
SNX3-204ENST00000426155 NDOR1Q9UHB4 597 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 TCFL5Q9UL49 500 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 SNX7Q9UNH6 387 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 SRPK3Q9UPE1 567 aa13.04□□□□□ -0.32
SNX3-204ENST00000426155 ZNF839A8K0R7 811 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 DYNC1I1O14576 645 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 SLC16A5O15375 505 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 FKBP9O95302 570 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 GUCA1CO95843 209 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 HBQ1P09105 142 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 RAB40ALP0C0E4 278 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 ALAS2P22557 587 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 HSD17B2P37059 387 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 CCR10P46092 362 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 SNRPNP63162 240 aaKnown RBP13.03□□□□□ -0.32
SNX3-204ENST00000426155 PRDX1Q06830 199 aaKnown RBP13.03□□□□□ -0.32
SNX3-204ENST00000426155 NAE1Q13564 534 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 PPP1R3AQ16821 1122 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 UGT8Q16880 541 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 NKAIN1Q4KMZ8 207 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 CRTC2Q53ET0 693 aaPredicted RBP13.03□□□□□ -0.32
SNX3-204ENST00000426155 WASHC2DQ5SRD0 308 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 MLIPQ5VWP3 458 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 FBXO42Q6P3S6 717 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 SBSNQ6UWP8 590 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 SYVN1Q86TM6 617 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 CTAGE3PQ8IX95 158 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 SPATA6LQ8N4H0 392 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 MCOLN3Q8TDD5 553 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 FBF1Q8TES7 1133 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 SEC14L1Q92503 715 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 PYCR2Q96C36 320 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 CCDC138Q96M89 665 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 HS3ST6Q96QI5 342 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 RBBP8Q99708 897 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 ZFYVE21Q9BQ24 234 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 ARL15Q9NXU5 204 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 NSMCE4AQ9NXX6 385 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 POLHQ9Y253 713 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 MAN2B2Q9Y2E5 1009 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 KCNMB2Q9Y691 235 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 ZNF462Q96JM2 2506 aa13.03□□□□□ -0.32
SNX3-204ENST00000426155 A0A1B0GX78 115 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 CTAGE15A4D2H0 777 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 FITM1A5D6W6 292 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 C9J4A7 227 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 H0YGG7 62 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 H7BY64 318 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 P2RX6O15547 441 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 PHGDHO43175 533 aaKnown RBP13.02□□□□□ -0.33
SNX3-204ENST00000426155 KLF7O75840 302 aaPredicted RBP13.02□□□□□ -0.33
SNX3-204ENST00000426155 CCNDBP1O95273 360 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 WISP3O95389 354 aaPredicted RBP13.02□□□□□ -0.33
SNX3-204ENST00000426155 CTAGE8P0CG41 777 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 AGXTP21549 392 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 OR1D4P47884 311 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 ARF3P61204 181 aaPredicted RBP13.02□□□□□ -0.33
SNX3-204ENST00000426155 DCDP81605 110 aaKnown RBP13.02□□□□□ -0.33
SNX3-204ENST00000426155 NFATC3Q12968 1075 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 KCNAB2Q13303 367 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 GRM7Q14831 915 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 HKDC1Q2TB90 917 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 COX15Q7KZN9 410 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 CTAGE6Q86UF2 777 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 CTAGE4Q8IX94 777 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 PPM1NQ8N819 430 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms