RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 DHRS4Q9BTZ2 278 aa12.19□□□□□ -0.46
SGCE-203ENST00000425444 ACAT2Q9BWD1 397 aa12.19□□□□□ -0.46
SGCE-203ENST00000425444 PPANQ9NQ55 473 aaKnown RBP12.19□□□□□ -0.46
SGCE-203ENST00000425444 IFT80Q9P2H3 777 aaPredicted RBP12.19□□□□□ -0.46
SGCE-203ENST00000425444 DHCR7Q9UBM7 475 aaKnown RBP12.19□□□□□ -0.46
SGCE-203ENST00000425444 TRMT6Q9UJA5 497 aaKnown RBP12.19□□□□□ -0.46
SGCE-203ENST00000425444 CHMP2BQ9UQN3 213 aa12.19□□□□□ -0.46
SGCE-203ENST00000425444 PCDHGB7Q9Y5F8 929 aa12.19□□□□□ -0.46
SGCE-203ENST00000425444 ZNF839A8K0R7 811 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 H3BMH7 237 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 CCDC188H7C350 402 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 TTI1O43156 1089 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 PSIP1O75475 530 aaKnown RBP12.18□□□□□ -0.46
SGCE-203ENST00000425444 HAUS5O94927 633 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 ERVK-10P10266 1014 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 ENO3P13929 434 aaPredicted RBP12.18□□□□□ -0.46
SGCE-203ENST00000425444 ALAS2P22557 587 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 CMPK1P30085 196 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 RPA3P35244 121 aaPredicted RBP12.18□□□□□ -0.46
SGCE-203ENST00000425444 GRIA3P42263 894 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 PER3P56645 1201 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 DCDP81605 110 aaKnown RBP12.18□□□□□ -0.46
SGCE-203ENST00000425444 FASTKQ14296 549 aaKnown RBP12.18□□□□□ -0.46
SGCE-203ENST00000425444 NAA25Q14CX7 972 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 CYP2A13Q16696 494 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 MSS51Q4VC12 460 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 FAM69BQ5VUD6 431 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 ZNF549Q6P9A3 640 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 NEK10Q6ZWH5 1172 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 RAB43Q86YS6 212 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 MCATQ8IVS2 390 aaKnown RBP12.18□□□□□ -0.46
SGCE-203ENST00000425444 CPNE9Q8IYJ1 553 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 IQCKQ8N0W5 287 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 RBMXL3Q8N7X1 1067 aaKnown RBP12.18□□□□□ -0.46
SGCE-203ENST00000425444 TTC29Q8NA56 475 aaPredicted RBP12.18□□□□□ -0.46
SGCE-203ENST00000425444 C2CD4AQ8NCU7 369 aaPredicted RBP12.18□□□□□ -0.46
SGCE-203ENST00000425444 OR2L3Q8NG85 312 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 HMGCLL1Q8TB92 370 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 SMPDL3AQ92484 453 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 INPP5DQ92835 1189 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 ZUFSPQ96AP4 578 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 NDNQ99608 321 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 AARSD1Q9BTE6 412 aaKnown RBP12.18□□□□□ -0.46
SGCE-203ENST00000425444 TRIM31Q9BZY9 425 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 ABCF3Q9NUQ8 709 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 KLHL42Q9P2K6 505 aa12.18□□□□□ -0.46
SGCE-203ENST00000425444 G3BP2Q9UN86 482 aaKnown RBP12.18□□□□□ -0.46
SGCE-203ENST00000425444 MYO7BQ6PIF6 2116 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 TARM1B6A8C7 271 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 MYO1CO00159 1063 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 SMAPO00193 183 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 LRRTM2O43300 516 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 ZBTB14O43829 449 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 PRICKLE3O43900 615 aaPredicted RBP12.17□□□□□ -0.46
SGCE-203ENST00000425444 CAPN1P07384 714 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 MPC1LP0DKB6 136 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 MCM3P25205 808 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 OTX2P32243 289 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 HSD17B2P37059 387 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 FOLR3P41439 243 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 CARSP49589 748 aaKnown RBP12.17□□□□□ -0.46
SGCE-203ENST00000425444 ARSFP54793 590 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 ARL4CP56559 192 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 ZRSR2Q15696 482 aaKnown RBP12.17□□□□□ -0.46
SGCE-203ENST00000425444 HIF1AQ16665 826 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 TCTE1Q5JU00 501 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 HP1BP3Q5SSJ5 553 aaPredicted RBP12.17□□□□□ -0.46
SGCE-203ENST00000425444 ZNF385CQ66K41 422 aaPredicted RBP12.17□□□□□ -0.46
SGCE-203ENST00000425444 UGT3A1Q6NUS8 523 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 SUSD1Q6UWL2 747 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 TTLL10Q6ZVT0 673 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 GDF7Q7Z4P5 450 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 OR2A1Q8NGT9 310 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 CD200R1Q8TD46 325 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 CERS2Q96G23 380 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 SNF8Q96H20 258 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 GBP5Q96PP8 586 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 KRT12Q99456 494 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 RNF14Q9UBS8 474 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 ZC3H7BQ9UGR2 993 aaKnown RBP12.17□□□□□ -0.46
SGCE-203ENST00000425444 MED16Q9Y2X0 877 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 DHRS7Q9Y394 339 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 PTRH2Q9Y3E5 179 aaKnown RBP12.17□□□□□ -0.46
SGCE-203ENST00000425444 ACANP16112 2415 aa12.17□□□□□ -0.46
SGCE-203ENST00000425444 SPTBP11277 2137 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 A0A0J9YVX5 310 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 A0A1B0GX78 115 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 A0A1W2PPV9 198 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 EFCAB8A8MWE9 144 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 CCNDBP1O95273 360 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 EIF2S1P05198 315 aaKnown RBP12.16□□□□□ -0.46
SGCE-203ENST00000425444 CD63P08962 238 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 ERGP11308 486 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 IVDP26440 423 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 ELK3P41970 407 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 RGS4P49798 205 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 ITGA8P53708 1063 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 PNLIPRP1P54315 467 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 VSX2P58304 361 aaPredicted RBP12.16□□□□□ -0.46
SGCE-203ENST00000425444 GRM7Q14831 915 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms