RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 FIS1Q9Y3D6 152 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 DNAJC15Q9Y5T4 150 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 COPG1Q9Y678 874 aaKnown RBP15.13■□□□□ 0.01
SHOX2-202ENST00000425436 KIR2DS5A0A0G2JLQ3 304 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 A0A0G2JNG1 304 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 EME2A4GXA9 379 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 PABPN1LA6NDY0 278 aaKnown RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 OR5K4A6NMS3 321 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 KIR2DS3K7RE56 304 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 E2F3O00716 465 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 JUNP05412 331 aaKnown RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 CEACAM1P13688 526 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 SLC2A4P14672 509 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 GLB1P16278 677 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 XRCC1P18887 633 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 ACP1P24666 158 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 MAPK9P45984 424 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 PIK3CGP48736 1102 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 DUSP3P51452 185 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 CDKL1Q00532 357 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 ABRQ12979 859 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 RPA4Q13156 261 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 CUL3Q13618 768 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 KIR2DS5Q14953 304 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 PPP1R3AQ16821 1122 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 ACSBG2Q5FVE4 666 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 GPRIN3Q6ZVF9 776 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 RPS27LQ71UM5 84 aaKnown RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 SPATA19Q7Z5L4 167 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 SLC9B2Q86UD5 537 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 SLCO6A1Q86UG4 719 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 TRIM48Q8IWZ4 208 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 ULK2Q8IYT8 1036 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 TCAIMQ8N3R3 496 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 POU5F2Q8N7G0 328 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 Q8N9G6 341 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 TWIST2Q8WVJ9 160 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 CCDC74AQ96AQ1 378 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 CXorf40BQ96DE9 158 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 RNPEPL1Q9HAU8 725 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 SEMA4BQ9NPR2 832 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 TMEM45AQ9NWC5 275 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 TOR4AQ9NXH8 423 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 UTP6Q9NYH9 597 aaKnown RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 PRPF19Q9UMS4 504 aaKnown RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 NCF1BA6NI72 391 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 RHPN2P1A8MT19 583 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 A8MUI8 341 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 NCF1CA8MVU1 366 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 PSMD12O00232 456 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 SLCO2B1O94956 709 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 OTCP00480 354 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 VIPP01282 170 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 NCF1P14598 390 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 LBPP18428 481 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 HHEXQ03014 270 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 SP140Q13342 867 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 ART3Q13508 389 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 RBBP7Q16576 425 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 GSTA3Q16772 222 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 CLEC6AQ6EIG7 209 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 GLRX5Q86SX6 157 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 ENDOVQ8N8Q3 282 aaKnown RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 UBTD2Q8WUN7 234 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 SKA2Q8WVK7 121 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 STMN2Q93045 179 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 FERD3LQ96RJ6 166 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 MRPL1Q9BYD6 325 aaKnown RBP15.12■□□□□ 0.01
SHOX2-202ENST00000425436 TNFRSF12AQ9NP84 129 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 RIC8BQ9NVN3 520 aa15.12■□□□□ 0.01
SHOX2-202ENST00000425436 IFRD1O00458 451 aaPredicted RBP15.11■□□□□ 0.01
SHOX2-202ENST00000425436 NUDT21O43809 227 aaKnown RBP15.11■□□□□ 0.01
SHOX2-202ENST00000425436 CCNT2O60583 730 aaKnown RBP15.11■□□□□ 0.01
SHOX2-202ENST00000425436 ANXA5P08758 320 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 HIST1H2AGP0C0S8 130 aaPredicted RBP15.11■□□□□ 0.01
SHOX2-202ENST00000425436 MTHFD1P11586 935 aaKnown RBP15.11■□□□□ 0.01
SHOX2-202ENST00000425436 TSPAN8P19075 237 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 HIST1H2ADP20671 130 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 ACADLP28330 430 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 ALDH4A1P30038 563 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 FASLGP48023 281 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 OR1D5P58170 312 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 UBE2IP63279 158 aaKnown RBP15.11■□□□□ 0.01
SHOX2-202ENST00000425436 SLC25A3Q00325 362 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 GBX1Q14549 363 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.11■□□□□ 0.01
SHOX2-202ENST00000425436 TMEM198Q66K66 360 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 OGFOD2Q6N063 350 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 PDZD3Q86UT5 571 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 SNX32Q86XE0 403 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 DDIASQ8IXT1 998 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 SLC22A15Q8IZD6 547 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 JPH3Q8WXH2 748 aaPredicted RBP15.11■□□□□ 0.01
SHOX2-202ENST00000425436 TFGQ92734 400 aaPredicted RBP15.11■□□□□ 0.01
SHOX2-202ENST00000425436 HIST1H2AHQ96KK5 128 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 NSUN5Q96P11 429 aaKnown RBP15.11■□□□□ 0.01
SHOX2-202ENST00000425436 HIST1H2AJQ99878 128 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 CCDC3Q9BQI4 270 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 H2AFJQ9BTM1 129 aa15.11■□□□□ 0.01
SHOX2-202ENST00000425436 BCAP29Q9UHQ4 241 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms