RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 PEX12O00623 359 aa20.56■□□□□ 0.88
CDCP1-202ENST00000425231 TP73O15350 636 aa20.56■□□□□ 0.88
CDCP1-202ENST00000425231 EIF2S1P05198 315 aaKnown RBP20.56■□□□□ 0.88
CDCP1-202ENST00000425231 IMPA1P29218 277 aa20.56■□□□□ 0.88
CDCP1-202ENST00000425231 CARSP49589 748 aaKnown RBP20.56■□□□□ 0.88
CDCP1-202ENST00000425231 ARF3P61204 181 aaPredicted RBP20.56■□□□□ 0.88
CDCP1-202ENST00000425231 HP1BP3Q5SSJ5 553 aaPredicted RBP20.56■□□□□ 0.88
CDCP1-202ENST00000425231 RBM20Q5T481 1227 aaKnown RBP20.56■□□□□ 0.88
CDCP1-202ENST00000425231 UGT3A1Q6NUS8 523 aa20.56■□□□□ 0.88
CDCP1-202ENST00000425231 PDIK1LQ8N165 341 aa20.56■□□□□ 0.88
CDCP1-202ENST00000425231 METTL27Q8N6F8 245 aaPredicted RBP20.56■□□□□ 0.88
CDCP1-202ENST00000425231 GABPB2Q8TAK5 448 aaPredicted RBP20.56■□□□□ 0.88
CDCP1-202ENST00000425231 MIB2Q96AX9 1013 aa20.56■□□□□ 0.88
CDCP1-202ENST00000425231 TAS2R13Q9NYV9 303 aa20.56■□□□□ 0.88
CDCP1-202ENST00000425231 STOX2Q9P2F5 926 aaPredicted RBP20.56■□□□□ 0.88
CDCP1-202ENST00000425231 CTSFQ9UBX1 484 aa20.56■□□□□ 0.88
CDCP1-202ENST00000425231 TRMT6Q9UJA5 497 aaKnown RBP20.56■□□□□ 0.88
CDCP1-202ENST00000425231 MAU2Q9Y6X3 613 aa20.56■□□□□ 0.88
CDCP1-202ENST00000425231 MDC1Q14676 2089 aaKnown RBP20.56■□□□□ 0.88
CDCP1-202ENST00000425231 COL12A1Q99715 3063 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 VSTM2BA6NLU5 285 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 MASP2O00187 686 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 SMAPO00193 183 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 IGHEP01854 428 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 MMP11P24347 488 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 ELK3P41970 407 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 CDKN2DP55273 166 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 RELAQ04206 551 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 RAPSNQ13702 412 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 TEDDM1Q5T9Z0 273 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 PAQR3Q6TCH7 311 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 KIAA0408Q6ZU52 694 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 GALNT7Q86SF2 657 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 C10orf90Q96M02 699 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 OR2A5Q96R48 311 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 TRIM51Q9BSJ1 452 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 SLC17A6Q9P2U8 582 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 ADAMTS6Q9UKP5 1117 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 G3BP2Q9UN86 482 aaKnown RBP20.55■□□□□ 0.88
CDCP1-202ENST00000425231 TEX264Q9Y6I9 313 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 FLNCQ14315 2725 aa20.55■□□□□ 0.88
CDCP1-202ENST00000425231 CCDC188H7C350 402 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 AGPSO00116 658 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 TTI1O43156 1089 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 CCNDBP1O95273 360 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 CD97P48960 835 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 EMP3P54852 163 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 SOX8P57073 446 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 ABATP80404 500 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 LRRC8EQ6NSJ5 796 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 TRMT10BQ6PF06 316 aaKnown RBP20.54■□□□□ 0.88
CDCP1-202ENST00000425231 CLEC1AQ8NC01 280 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 LRRC39Q96DD0 335 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 ZNF304Q9HCX3 659 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 NXT1Q9UKK6 140 aaKnown RBP20.54■□□□□ 0.88
CDCP1-202ENST00000425231 CHMP2BQ9UQN3 213 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 PDE10AQ9Y233 779 aa20.54■□□□□ 0.88
CDCP1-202ENST00000425231 SORBS2O94875 1100 aaKnown RBP20.53■□□□□ 0.88
CDCP1-202ENST00000425231 SEC31AO94979 1220 aaKnown RBP20.53■□□□□ 0.88
CDCP1-202ENST00000425231 EZRP15311 586 aaKnown RBP20.53■□□□□ 0.88
CDCP1-202ENST00000425231 ITGA8P53708 1063 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 MUM1Q2TAK8 710 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 NUP210LQ5VU65 1888 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 STEAP4Q687X5 459 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 PRMT9Q6P2P2 845 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 SHISA6Q6ZSJ9 500 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 HPS6Q86YV9 775 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 GALNT16Q8N428 558 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 ARHGEF39Q8N4T4 335 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 RBMXL3Q8N7X1 1067 aaKnown RBP20.53■□□□□ 0.88
CDCP1-202ENST00000425231 SOX17Q9H6I2 414 aaPredicted RBP20.53■□□□□ 0.88
CDCP1-202ENST00000425231 ABCF3Q9NUQ8 709 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 CUEDC1Q9NWM3 386 aaPredicted RBP20.53■□□□□ 0.88
CDCP1-202ENST00000425231 UTP6Q9NYH9 597 aaKnown RBP20.53■□□□□ 0.88
CDCP1-202ENST00000425231 C5AR2Q9P296 337 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 RUVBL1Q9Y265 456 aaKnown RBP20.53■□□□□ 0.88
CDCP1-202ENST00000425231 HS3ST3B1Q9Y662 390 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 TTLL8A6PVC2 850 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 SOCS6O14544 535 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 DPM1O60762 260 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 PAFAH1B1P43034 410 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 RGS4P49798 205 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 MYBPC3Q14896 1274 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 HIF1AQ16665 826 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 HKDC1Q2TB90 917 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 JMJD6Q6NYC1 403 aaPredicted RBP20.53■□□□□ 0.88
CDCP1-202ENST00000425231 CSNK1A1LQ8N752 337 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 MCOLN3Q8TDD5 553 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 COL26A1Q96A83 441 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 CFAP36Q96G28 342 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 ZNF552Q9H707 407 aaPredicted RBP20.53■□□□□ 0.88
CDCP1-202ENST00000425231 ATP13A2Q9NQ11 1180 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 PPANQ9NQ55 473 aaKnown RBP20.53■□□□□ 0.88
CDCP1-202ENST00000425231 RNF14Q9UBS8 474 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 CDC23Q9UJX2 597 aa20.53■□□□□ 0.88
CDCP1-202ENST00000425231 TSPAN12O95859 305 aa20.52■□□□□ 0.87
CDCP1-202ENST00000425231 C8GP07360 202 aa20.52■□□□□ 0.87
CDCP1-202ENST00000425231 THEMIS2Q5TEJ8 643 aa20.52■□□□□ 0.87
CDCP1-202ENST00000425231 VWA5B1Q5TIE3 1220 aa20.52■□□□□ 0.87
CDCP1-202ENST00000425231 KIRREL2Q6UWL6 708 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms