RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 FBXO5Q9UKT4 447 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 SRPK3Q9UPE1 567 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 PCDHGA10Q9Y5H3 936 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 KLK4Q9Y5K2 254 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 HS3ST3B1Q9Y662 390 aa12.42□□□□□ -0.42
VRK3-203ENST00000424804 DIDO1Q9BTC0 2240 aaKnown RBP12.42□□□□□ -0.42
VRK3-203ENST00000424804 CSMD1Q96PZ7 3565 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 SVILO95425 2214 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 A0A1W2PPV9 198 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 FITM1A5D6W6 292 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 FAM187AA6NFU0 413 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 VSTM2BA6NLU5 285 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 AGPSO00116 658 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 NRP2O60462 931 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 ALOX12BO75342 701 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 HAUS5O94927 633 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 TTC4O95801 387 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 CD63P08962 238 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 MMP11P24347 488 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 COL8A1P27658 744 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 YBX1P67809 324 aaKnown RBP12.41□□□□□ -0.42
VRK3-203ENST00000424804 CKAP4Q07065 602 aaKnown RBP12.41□□□□□ -0.42
VRK3-203ENST00000424804 Q0VFX4 171 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 CUL1Q13616 776 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 TSTA3Q13630 321 aaPredicted RBP12.41□□□□□ -0.42
VRK3-203ENST00000424804 KIRREL2Q6UWL6 708 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 UNC5DQ6UXZ4 953 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 TTLL10Q6ZVT0 673 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 DCUN1D3Q8IWE4 304 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 PRR7Q8TB68 274 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 N4BP2L2Q92802 583 aaPredicted RBP12.41□□□□□ -0.42
VRK3-203ENST00000424804 FKBP10Q96AY3 582 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 CERS2Q96G23 380 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 NDNQ99608 321 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 NAT9Q9BTE0 207 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 NDC1Q9BTX1 674 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 SYNPO2LQ9H987 977 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 ATP13A2Q9NQ11 1180 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 NDOR1Q9UHB4 597 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 GPN3Q9UHW5 284 aaPredicted RBP12.41□□□□□ -0.42
VRK3-203ENST00000424804 MYO9AB2RTY4 2548 aa12.41□□□□□ -0.42
VRK3-203ENST00000424804 A0A1B0GX78 115 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 A1L4Q6 167 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 SMAPO00193 183 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 RASGRF2O14827 1237 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 DSCR3O14972 297 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 VPS26AO75436 327 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 C1orf105O95561 183 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 DDAH2O95865 285 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 ALBP02768 609 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 VARSP26640 1264 aaKnown RBP12.4□□□□□ -0.42
VRK3-203ENST00000424804 GBX1Q14549 363 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 KLHL38Q2WGJ6 581 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 TTLL9Q3SXZ7 439 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 ACSBG2Q5FVE4 666 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 FRMPD2BQ6IN97 320 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 LMNTD2Q8IXW0 634 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 ZBED8Q8IZ13 594 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 IQCKQ8N0W5 287 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 RAB42Q8N4Z0 105 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 CLEC1AQ8NC01 280 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 BBOF1Q8ND07 529 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 FBXO36Q8NEA4 188 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 NACC2Q96BF6 587 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 GPR21Q99679 349 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 ERP44Q9BS26 406 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 WDR54Q9H977 334 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 TXLNGQ9NUQ3 528 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 ABCF3Q9NUQ8 709 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 IRAK4Q9NWZ3 460 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.4□□□□□ -0.42
VRK3-203ENST00000424804 FBXL4Q9UKA2 621 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 UTP11Q9Y3A2 253 aaKnown RBP12.4□□□□□ -0.42
VRK3-203ENST00000424804 LRBAP50851 2863 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 CROCCQ5TZA2 2017 aa12.4□□□□□ -0.42
VRK3-203ENST00000424804 CREBBPQ92793 2442 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 LOC105369274A0A096LPK9 316 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 LOC102723532A0A0G2JNH3 316 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 TARM1B6A8C7 271 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 PEX12O00623 359 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 NDC80O14777 642 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 SYF2O95926 243 aaKnown RBP12.39□□□□□ -0.43
VRK3-203ENST00000424804 IGHEP01854 428 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 ALAS2P22557 587 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 PSMB5P28074 263 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 OR1D4P47884 311 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 ARSFP54793 590 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 ADARP55265 1226 aaKnown RBP12.39□□□□□ -0.43
VRK3-203ENST00000424804 AIMP2Q13155 320 aaKnown RBP12.39□□□□□ -0.43
VRK3-203ENST00000424804 FASTKD3Q14CZ7 662 aaKnown RBP12.39□□□□□ -0.43
VRK3-203ENST00000424804 ZNF787Q6DD87 383 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 FBXO42Q6P3S6 717 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 ZNF549Q6P9A3 640 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 TRMT10BQ6PF06 316 aaKnown RBP12.39□□□□□ -0.43
VRK3-203ENST00000424804 CCDC25Q86WR0 208 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 OR4N4Q8N0Y3 316 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 C2CD4AQ8NCU7 369 aaPredicted RBP12.39□□□□□ -0.43
VRK3-203ENST00000424804 OR2A1Q8NGT9 310 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 HMGCLL1Q8TB92 370 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms