RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 MKKSQ9NPJ1 570 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-203ENST00000424270 ETNK2Q9NVF9 386 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 OR6C2Q9NZP2 312 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 NFKBIL1Q9UBC1 381 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-203ENST00000424270 PKP3Q9Y446 797 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 A0A0J9YVX5 310 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 CFAP99D6REC4 459 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 FCHO1O14526 889 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 MATN3O15232 486 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 WDR1O75083 606 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 F13A1P00488 732 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 HSP90AA1P07900 732 aaKnown RBP5.94□□□□□ -1.46
SDCBP-203ENST00000424270 CFPP27918 469 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 PRKCIP41743 596 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 CPA2P48052 419 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 ATP5J2P56134 94 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 DEFA6Q01524 100 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 NIPAL4Q0D2K0 466 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 ACKR1Q16570 336 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 C8orf34Q49A92 452 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 FIGNQ5HY92 759 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 RIPPLY2Q5TAB7 128 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 BLOC1S3Q6QNY0 202 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 LANCL3Q6ZV70 420 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 BTLAQ7Z6A9 289 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 RPS19BP1Q86WX3 136 aaKnown RBP5.94□□□□□ -1.46
SDCBP-203ENST00000424270 LRRC49Q8IUZ0 686 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 MEIOBQ8N635 442 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 OR5AR1Q8NGP9 310 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 ARRDC2Q8TBH0 407 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 TMEM171Q8WVE6 324 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 SLC22A18Q96BI1 424 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 ZMYND19Q96E35 227 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-203ENST00000424270 IMMP1LQ96LU5 166 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 CSPG4P5Q96PW8 444 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 SH3GL2Q99962 352 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 SHARPINQ9H0F6 387 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 RBSNQ9H1K0 784 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 COG4Q9H9E3 785 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 IL26Q9NPH9 171 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.94□□□□□ -1.46
SDCBP-203ENST00000424270 POLG2Q9UHN1 485 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 CRLS1Q9UJA2 301 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 RCOR1Q9UKL0 485 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 FAM215AQ9Y5M1 114 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 MEGF8Q7Z7M0 2845 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 CPAMD8Q8IZJ3 1885 aa5.94□□□□□ -1.46
SDCBP-203ENST00000424270 CUBNO60494 3623 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 SONP18583 2426 aaKnown RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 LOC102723996A0A087X1L8 192 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 A0A1W2PQ72 361 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 SH3D21A4FU49 640 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 OR14I1A6ND48 311 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 AURKAO14965 403 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 BUD23O43709 281 aaKnown RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 SRPX2O60687 465 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 ZSCAN22P10073 491 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 GABRA1P14867 456 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 TPP2P29144 1249 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 MIPP30301 263 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 SSR1P43307 286 aaKnown RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 CD151P48509 253 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 MAN2A2P49641 1150 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 OCRLQ01968 901 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 KRTAP1-1Q07627 177 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 BOP1Q14137 746 aaKnown RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 IHHQ14623 411 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 BRD3Q15059 726 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 IFI16Q16666 785 aaKnown RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 TPD52L1Q16890 204 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 CLEC12BQ2HXU8 276 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 SYTL3Q4VX76 610 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 ZNF468Q5VIY5 522 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 GLT6D1Q7Z4J2 308 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 CYP4Z2PQ8N1L4 340 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 TMEM156Q8N614 296 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 RELL2Q8NC24 303 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 SGMS2Q8NHU3 365 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 M1APQ8TC57 530 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 ZNF398Q8TD17 642 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 BLOC1S5Q8TDH9 187 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 LRRN4Q8WUT4 740 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 SMPDL3BQ92485 455 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 SARAFQ96BY9 339 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 PIK3IP1Q96FE7 263 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 CAPZA3Q96KX2 299 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 SPATA13Q96N96 652 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 PEBP4Q96S96 227 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 REG4Q9BYZ8 158 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 GSX2Q9BZM3 304 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 CXorf56Q9H5V9 222 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 SIX2Q9NPC8 291 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 C6orf203Q9P0P8 240 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 LPAR3Q9UBY5 353 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 NDRG3Q9UGV2 375 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 AMACRQ9UHK6 382 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 ERVK-11Q9UQG0 969 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 DRG1Q9Y295 367 aaKnown RBP5.93□□□□□ -1.46
SDCBP-203ENST00000424270 ZNF281Q9Y2X9 895 aa5.93□□□□□ -1.46
SDCBP-203ENST00000424270 HRNRQ86YZ3 2850 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms