RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 STOX2Q9P2F5 926 aaPredicted RBP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 SPASTQ9UBP0 616 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 SLC23A2Q9UGH3 650 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 SNX8Q9Y5X2 465 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 OBSL1O75147 1896 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 CREG1O75629 220 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 PAK4O96013 591 aaPredicted RBP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 FTH1P02794 183 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 PIM1P11309 404 aaPredicted RBP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 PTNP21246 168 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 SMN1Q16637 294 aaKnown RBP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 C11orf74Q86VG3 221 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 GALNT15Q8N3T1 639 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 ANKFN1Q8N957 763 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 SMYD1Q8NB12 490 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 ZNF548Q8NEK5 533 aaPredicted RBP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 SDCCAG3Q96C92 435 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 RIBC2Q9H4K1 309 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 SERHLQ9NQF3 203 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 SMPD3Q9NY59 655 aaPredicted RBP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 RHCGQ9UBD6 479 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 ASF1AQ9Y294 204 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 CFAP99D6REC4 459 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 G3V2T6 193 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 SLC28A1O00337 649 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 ANXA4P09525 319 aaPredicted RBP11.54□□□□□ -0.56
PTPRN-204ENST00000423636 IMPA1P29218 277 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 OCA2Q04671 838 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 UGT8Q16880 541 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 FAM98BQ52LJ0 330 aaKnown RBP11.54□□□□□ -0.56
PTPRN-204ENST00000423636 CEP68Q76N32 757 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 EFL1Q7Z2Z2 1120 aaKnown RBP11.54□□□□□ -0.56
PTPRN-204ENST00000423636 DGLUCYQ7Z3D6 616 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 ZUFSPQ96AP4 578 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 MCCC1Q96RQ3 725 aaPredicted RBP11.54□□□□□ -0.56
PTPRN-204ENST00000423636 PAIP1Q9H074 479 aaKnown RBP11.54□□□□□ -0.56
PTPRN-204ENST00000423636 ATXN10Q9UBB4 475 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 SERGEFQ9UGK8 458 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 MAP4K5Q9Y4K4 846 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 ST14Q9Y5Y6 855 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 GLOD5A6NK44 160 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 XYLBO75191 536 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 FESP07332 822 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 TFPTP0C1Z6 253 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 GGT1P19440 569 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 CRATP43155 626 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 FPGSQ05932 587 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 ATP6AP1Q15904 470 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 ZNF805Q5CZA5 627 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 COX20Q5RI15 118 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 TANGO2Q6ICL3 276 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.54□□□□□ -0.56
PTPRN-204ENST00000423636 RD3Q7Z3Z2 195 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 AHI1Q8N157 1196 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 ZNF480Q8WV37 535 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 BTN2A2Q8WVV5 523 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 RAD9AQ99638 391 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 CLMPQ9H6B4 373 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 SNX6Q9UNH7 406 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 CA5BQ9Y2D0 317 aa11.54□□□□□ -0.56
PTPRN-204ENST00000423636 H0Y858 1186 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 CLIC1O00299 241 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 UPK1AO00322 258 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 WNT9AO14904 365 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 PRKRAO75569 313 aaKnown RBP11.53□□□□□ -0.56
PTPRN-204ENST00000423636 C6P13671 934 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 AMD1P17707 334 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 FMO3P31513 532 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 SOAT1P35610 550 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 KIR3DL1P43629 444 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 MAPK8P45983 427 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 ARSFP54793 590 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 CWF19L1Q69YN2 538 aaKnown RBP11.53□□□□□ -0.56
PTPRN-204ENST00000423636 CCDC81Q6ZN84 652 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 ZDHHC13Q8IUH4 622 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 FGF13Q92913 245 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 ZNF707Q96C28 371 aaPredicted RBP11.53□□□□□ -0.56
PTPRN-204ENST00000423636 DGCR14Q96DF8 476 aaKnown RBP11.53□□□□□ -0.56
PTPRN-204ENST00000423636 RNF31Q96EP0 1072 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 C9orf16Q9BUW7 83 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 NTMT1Q9BV86 223 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 CLK4Q9HAZ1 481 aaKnown RBP11.53□□□□□ -0.56
PTPRN-204ENST00000423636 PCDHGA11Q9Y5H2 935 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 SNX11Q9Y5W9 270 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 CACNA1IQ9P0X4 2223 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 PCM1Q15154 2024 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 PLXND1Q9Y4D7 1925 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 IGLON5A6NGN9 336 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 GABRR3A8MPY1 467 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 MAGEB3O15480 346 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 POP7O75817 140 aaKnown RBP11.53□□□□□ -0.56
PTPRN-204ENST00000423636 KLK1P06870 262 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 ZNF8P17098 575 aaPredicted RBP11.53□□□□□ -0.56
PTPRN-204ENST00000423636 CD247P20963 164 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 PRMT2P55345 433 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 EEFSECP57772 596 aaKnown RBP11.53□□□□□ -0.56
PTPRN-204ENST00000423636 TBPL1P62380 186 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 DGCR6Q14129 220 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 ZNF234Q14588 700 aa11.53□□□□□ -0.56
PTPRN-204ENST00000423636 MPP7Q5T2T1 576 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms