RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 E9PMD0 336 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 AQP7O14520 342 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 TMCC2O75069 709 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 FAM155BO75949 473 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 TJP3O95049 919 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NR3C1P04150 777 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ATP1A3P13637 1013 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 CD44P16070 742 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF37AP17032 561 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ARF4P18085 180 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 POLR2CP19387 275 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 HRH2P25021 359 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 S100A7P31151 101 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 GRK5P34947 590 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 BMI1P35226 326 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 PPIAP62937 165 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 POU5F1BQ06416 359 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 MMRN1Q13201 1228 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 GAB1Q13480 694 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 SHBQ15464 509 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 FAM153CQ494X1 144 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF658BQ4V348 819 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF805Q5CZA5 627 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 SOHLH1Q5JUK2 328 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 AMIGO1Q86WK6 493 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 IFT20Q8IY31 132 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 UBQLNLQ8IYU4 475 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NAXEQ8NCW5 288 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ATXN7L3BQ96GX2 97 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 RSRC1Q96IZ7 334 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ZSCAN5AQ9BUG6 496 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 OSBPL10Q9BXB5 764 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 EPB41L4BQ9H329 900 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 RAD21L1Q9H4I0 556 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 MVB12BQ9H7P6 319 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 RAB18Q9NP72 206 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 KCNMB3Q9NPA1 279 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 PCSK1NQ9UHG2 260 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 COMMD3-BMI1R4GMX3 469 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 DENND4CQ5VZ89 1909 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 A6NLC8 198 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 C9orf172C9J069 976 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 AKR1B15C9JRZ8 316 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 O00370 1275 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 EPHB6O15197 1021 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 DNAJA2O60884 412 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 PIAS2O75928 621 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 SEC31AO94979 1220 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 TOP3BO95985 862 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ETS1P14921 441 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 TSPAN8P19075 237 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 GSK3BP49841 420 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 CLRN1P58418 232 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 CYP4F2P78329 520 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 FKBP3Q00688 224 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF234Q14588 700 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 LARS2Q15031 903 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ULK2Q8IYT8 1036 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 METTL25Q8N6Q8 603 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 OR4E2Q8NGC2 313 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 CCDC124Q96CT7 223 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 TRIB1Q96RU8 372 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 OR2AG1Q9H205 316 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 MAGEH1Q9H213 219 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 TRABDQ9H4I3 376 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NECTIN3Q9NQS3 549 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 SEMA3GQ9NS98 782 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 BLOC1S4Q9NUP1 217 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ZIM2Q9NZV7 527 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 HEY2Q9UBP5 337 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 OR5V1Q9UGF6 321 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 AMFRQ9UKV5 643 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 LRCH1Q9Y2L9 728 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 GBF1Q92538 1859 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NINQ8N4C6 2090 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 C17orf113A0A1B0GUU1 675 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 DPPA5A6NC42 116 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 OR6C74A6NCV1 312 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NKX6-3A6NJ46 265 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 SEC14L5O43304 696 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 TCF21O43680 179 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NUDT21O43809 227 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 MT-CYBP00156 380 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 FAM163BP0C2L3 166 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ECHS1P30084 290 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 FEN1P39748 380 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 GPR3P46089 330 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NKX6-1P78426 367 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 BASP1P80723 227 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ROR2Q01974 943 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 TRADDQ15628 312 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NRF1Q16656 503 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 CBWD6Q4V339 395 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ZC3H12AQ5D1E8 599 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 JMJD6Q6NYC1 403 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 PGBD2Q6P3X8 592 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 BTNL9Q6UXG8 535 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 LRIG3Q6UXM1 1119 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NEK10Q6ZWH5 1172 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 TRIM42Q8IWZ5 723 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms