RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CHAF1BQ13112 559 aa2.57□□□□□ -2
VPS41-206ENST00000418457 PRKG2Q13237 762 aa2.57□□□□□ -2
VPS41-206ENST00000418457 DYNC1I2Q13409 638 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 ACVR2BQ13705 512 aa2.57□□□□□ -2
VPS41-206ENST00000418457 IRF3Q14653 427 aa2.57□□□□□ -2
VPS41-206ENST00000418457 E2F5Q15329 346 aa2.57□□□□□ -2
VPS41-206ENST00000418457 UAP1Q16222 522 aaPredicted RBP2.57□□□□□ -2
VPS41-206ENST00000418457 IL17AQ16552 155 aa2.57□□□□□ -2
VPS41-206ENST00000418457 SGSM1Q2NKQ1 1148 aa2.57□□□□□ -2
VPS41-206ENST00000418457 PARP6Q2NL67 630 aa2.57□□□□□ -2
VPS41-206ENST00000418457 ZCWPW2Q504Y3 356 aa2.57□□□□□ -2
VPS41-206ENST00000418457 CAVIN4Q5BKX8 364 aa2.57□□□□□ -2
VPS41-206ENST00000418457 PLEKHS1Q5SXH7 462 aa2.57□□□□□ -2
VPS41-206ENST00000418457 RARS2Q5T160 578 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 IRAK1BP1Q5VVH5 260 aa2.57□□□□□ -2
VPS41-206ENST00000418457 NSUN5P2Q63ZY6 315 aa2.57□□□□□ -2
VPS41-206ENST00000418457 TMEM198Q66K66 360 aa2.57□□□□□ -2
VPS41-206ENST00000418457 TUBA1AQ71U36 451 aa2.57□□□□□ -2
VPS41-206ENST00000418457 H2AFVQ71UI9 128 aa2.57□□□□□ -2
VPS41-206ENST00000418457 TRMT10CQ7L0Y3 403 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 BZW1Q7L1Q6 419 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 PEX26Q7Z412 305 aa2.57□□□□□ -2
VPS41-206ENST00000418457 SZRD1Q7Z422 152 aa2.57□□□□□ -2
VPS41-206ENST00000418457 SATL1Q86VE3 508 aa2.57□□□□□ -2
VPS41-206ENST00000418457 FAM228AQ86W67 206 aa2.57□□□□□ -2
VPS41-206ENST00000418457 EPHX4Q8IUS5 362 aa2.57□□□□□ -2
VPS41-206ENST00000418457 EGFL6Q8IUX8 553 aa2.57□□□□□ -2
VPS41-206ENST00000418457 ARID3BQ8IVW6 561 aaPredicted RBP2.57□□□□□ -2
VPS41-206ENST00000418457 MFN1Q8IWA4 741 aa2.57□□□□□ -2
VPS41-206ENST00000418457 KLHL7Q8IXQ5 586 aa2.57□□□□□ -2
VPS41-206ENST00000418457 CCDC65Q8IXS2 484 aa2.57□□□□□ -2
VPS41-206ENST00000418457 ZC3H3Q8IXZ2 948 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 C1orf87Q8N0U7 546 aa2.57□□□□□ -2
VPS41-206ENST00000418457 RIBC1Q8N443 379 aaPredicted RBP2.57□□□□□ -2
VPS41-206ENST00000418457 UBL4BQ8N7F7 174 aa2.57□□□□□ -2
VPS41-206ENST00000418457 RBMXL3Q8N7X1 1067 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 ZNF441Q8N8Z8 693 aa2.57□□□□□ -2
VPS41-206ENST00000418457 KIAA0895Q8NCT3 520 aa2.57□□□□□ -2
VPS41-206ENST00000418457 ACVR1CQ8NER5 493 aa2.57□□□□□ -2
VPS41-206ENST00000418457 OR5R1Q8NH85 324 aa2.57□□□□□ -2
VPS41-206ENST00000418457 UTP15Q8TED0 518 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 ZFAND2BQ8WV99 257 aa2.57□□□□□ -2
VPS41-206ENST00000418457 SECTM1Q8WVN6 248 aa2.57□□□□□ -2
VPS41-206ENST00000418457 MAIP1Q8WWC4 291 aa2.57□□□□□ -2
VPS41-206ENST00000418457 RAD54LQ92698 747 aa2.57□□□□□ -2
VPS41-206ENST00000418457 MAGOHBQ96A72 148 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 NSUN4Q96CB9 384 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 TBC1D31Q96DN5 1066 aa2.57□□□□□ -2
VPS41-206ENST00000418457 SPDL1Q96EA4 605 aa2.57□□□□□ -2
VPS41-206ENST00000418457 HES6Q96HZ4 224 aa2.57□□□□□ -2
VPS41-206ENST00000418457 MS4A14Q96JA4 679 aa2.57□□□□□ -2
VPS41-206ENST00000418457 FAM210AQ96ND0 272 aa2.57□□□□□ -2
VPS41-206ENST00000418457 SERPINB12Q96P63 405 aa2.57□□□□□ -2
VPS41-206ENST00000418457 ZNF317Q96PQ6 595 aaPredicted RBP2.57□□□□□ -2
VPS41-206ENST00000418457 TMEM237Q96Q45 408 aa2.57□□□□□ -2
VPS41-206ENST00000418457 PSMB7Q99436 277 aa2.57□□□□□ -2
VPS41-206ENST00000418457 PCYT2Q99447 389 aa2.57□□□□□ -2
VPS41-206ENST00000418457 SEMA3CQ99985 751 aa2.57□□□□□ -2
VPS41-206ENST00000418457 TUBA1CQ9BQE3 449 aa2.57□□□□□ -2
VPS41-206ENST00000418457 SRSF8Q9BRL6 282 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 RIOK1Q9BRS2 568 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 CCDC28BQ9BUN5 200 aa2.57□□□□□ -2
VPS41-206ENST00000418457 TXLNGYQ9BZA5 131 aa2.57□□□□□ -2
VPS41-206ENST00000418457 ZMYND12Q9H0C1 365 aa2.57□□□□□ -2
VPS41-206ENST00000418457 GLT8D2Q9H1C3 349 aa2.57□□□□□ -2
VPS41-206ENST00000418457 VCXQ9H320 206 aa2.57□□□□□ -2
VPS41-206ENST00000418457 RABEP2Q9H5N1 569 aa2.57□□□□□ -2
VPS41-206ENST00000418457 RETREG1Q9H6L5 497 aa2.57□□□□□ -2
VPS41-206ENST00000418457 UBTD1Q9HAC8 227 aa2.57□□□□□ -2
VPS41-206ENST00000418457 KCNMB3Q9NPA1 279 aa2.57□□□□□ -2
VPS41-206ENST00000418457 TXLNGQ9NUQ3 528 aa2.57□□□□□ -2
VPS41-206ENST00000418457 TMEM30AQ9NV96 361 aa2.57□□□□□ -2
VPS41-206ENST00000418457 NSMCE4AQ9NXX6 385 aa2.57□□□□□ -2
VPS41-206ENST00000418457 TMOD3Q9NYL9 352 aa2.57□□□□□ -2
VPS41-206ENST00000418457 SEC63Q9UGP8 760 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 MTUS1Q9ULD2 1270 aa2.57□□□□□ -2
VPS41-206ENST00000418457 TFR2Q9UP52 801 aa2.57□□□□□ -2
VPS41-206ENST00000418457 GPR34Q9UPC5 381 aa2.57□□□□□ -2
VPS41-206ENST00000418457 ARL2BPQ9Y2Y0 163 aa2.57□□□□□ -2
VPS41-206ENST00000418457 PFASO15067 1338 aa2.57□□□□□ -2
VPS41-206ENST00000418457 BCL9O00512 1426 aa2.57□□□□□ -2
VPS41-206ENST00000418457 COL5A2P05997 1499 aaPredicted RBP2.57□□□□□ -2
VPS41-206ENST00000418457 ZNF831Q5JPB2 1677 aa2.57□□□□□ -2
VPS41-206ENST00000418457 NHSQ6T4R5 1651 aa2.57□□□□□ -2
VPS41-206ENST00000418457 A0A087X0T9 212 aa2.56□□□□□ -2
VPS41-206ENST00000418457 A0A1B0GUV1 79 aa2.56□□□□□ -2
VPS41-206ENST00000418457 hCG_1807616A0A1W2PRN6 198 aa2.56□□□□□ -2
VPS41-206ENST00000418457 LRRD1A4D1F6 860 aa2.56□□□□□ -2
VPS41-206ENST00000418457 EME2A4GXA9 379 aaPredicted RBP2.56□□□□□ -2
VPS41-206ENST00000418457 ZSCAN5CA6NGD5 496 aaPredicted RBP2.56□□□□□ -2
VPS41-206ENST00000418457 PRAC2D3DTV9 90 aa2.56□□□□□ -2
VPS41-206ENST00000418457 PDLIM1O00151 329 aa2.56□□□□□ -2
VPS41-206ENST00000418457 PDXKO00764 312 aa2.56□□□□□ -2
VPS41-206ENST00000418457 RASGRF2O14827 1237 aa2.56□□□□□ -2
VPS41-206ENST00000418457 EPHB6O15197 1021 aa2.56□□□□□ -2
VPS41-206ENST00000418457 TMCC2O75069 709 aa2.56□□□□□ -2
VPS41-206ENST00000418457 DCTN3O75935 186 aa2.56□□□□□ -2
VPS41-206ENST00000418457 NOL4O94818 638 aa2.56□□□□□ -2
VPS41-206ENST00000418457 CAMTA2O94983 1202 aa2.56□□□□□ -2
VPS41-206ENST00000418457 BAG3O95817 575 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms