RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 KRT87PA6NCN2 255 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 H3BMH7 237 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 EFSO43281 561 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 PIAS1O75925 651 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 FAM155BO75949 473 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 KIAA0754O94854 1291 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 TIAF1O95411 115 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 MAGP20916 626 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 GRIA3P42263 894 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 SLC18A1P54219 525 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 SLC12A2P55011 1212 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 AP1S2P56377 157 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 RELAQ04206 551 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 FASTKQ14296 549 aaKnown RBP12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 KIAA1614Q5VZ46 1190 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 FIGLAQ6QHK4 219 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 C6orf15Q6UXA7 325 aaPredicted RBP12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 SPNS2Q8IVW8 549 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 CEP97Q8IW35 865 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 CYP4X1Q8N118 509 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 OR2L3Q8NG85 312 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 SELENOSQ9BQE4 189 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 CAPS2Q9BXY5 557 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 TRIM54Q9BYV2 358 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 FAM117AQ9C073 453 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 ANKMY1Q9P2S6 941 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 PLCL2Q9UPR0 1127 aa12.72□□□□□ -0.37
TGFBR3-203ENST00000417833 PTPN13Q12923 2485 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 K7ENP7 123 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 PRPF4O43172 522 aaKnown RBP eCLIP12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 SCRG1O75711 98 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 HIST1H2AGP0C0S8 130 aaPredicted RBP12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 CCNYL3P0C7X3 344 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 HIST1H2ADP20671 130 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 IMPA1P29218 277 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 CMPK1P30085 196 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 ITGA1P56199 1179 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 ABATP80404 500 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 PRDX1Q06830 199 aaKnown RBP12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 VAC14Q08AM6 782 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 USP10Q14694 798 aaKnown RBP12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 ZKSCAN8Q15776 578 aaPredicted RBP12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 ZC3H12BQ5HYM0 836 aaKnown RBP12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 MANEAQ5SRI9 462 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 FCRL6Q6DN72 434 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 INO80CQ6PI98 192 aaPredicted RBP12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 ZNF517Q6ZMY9 492 aaPredicted RBP12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 CCDC81Q6ZN84 652 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 TIFABQ6ZNK6 161 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 IL22RA1Q8N6P7 574 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 OR1L3Q8NH93 324 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 HIST1H2AHQ96KK5 128 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 HIST1H2AJQ99878 128 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 H2AFJQ9BTM1 129 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 EFHD1Q9BUP0 239 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 DERL2Q9GZP9 239 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 KLHL25Q9H0H3 589 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 GPAMQ9HCL2 828 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 NKIRAS1Q9NYS0 192 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 STOX2Q9P2F5 926 aaPredicted RBP12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 PADI1Q9ULC6 663 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 AP1M2Q9Y6Q5 423 aa12.71□□□□□ -0.37
TGFBR3-203ENST00000417833 USP9XQ93008 2570 aaPredicted RBP12.71□□□□□ -0.38
TGFBR3-203ENST00000417833 PIEZO2Q9H5I5 2752 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 SNRNP200O75643 2136 aaKnown RBP12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 ATMQ13315 3056 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 OR2A25A4D2G3 310 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 TMEM150CB9EJG8 249 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 TRIM49D1C9J1S8 452 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 SRPX2O60687 465 aaPredicted RBP12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 CPNE3O75131 537 aaKnown RBP12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 CCNDBP1O95273 360 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 HBQ1P09105 142 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 STMN1P16949 149 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 SAT1P21673 171 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 CCND1P24385 295 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 HRH2P25021 359 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 PSMB5P28074 263 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 RPA3P35244 121 aaPredicted RBP12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 MDH1P40925 334 aaKnown RBP12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 STAT5AP42229 794 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 PGGT1BP53609 377 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 GYS2P54840 703 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 RAB10P61026 200 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 CDKL1Q00532 357 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 PHKG1Q16816 387 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 TLDC1Q6P9B6 456 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 AGTRAPQ6RW13 159 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 SUSD1Q6UWL2 747 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 SBSNQ6UWP8 590 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 CCDC91Q7Z6B0 441 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 TAX1BP1Q86VP1 789 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 TMEM126BQ8IUX1 230 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 FAM20CQ8IXL6 584 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 SYTL1Q8IYJ3 562 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 GALNT6Q8NCL4 622 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 ACMSDQ8TDX5 336 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 MZB1Q8WU39 189 aa12.7□□□□□ -0.38
TGFBR3-203ENST00000417833 ANKRD49Q8WVL7 239 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms