RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 INSIG1O15503 277 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 POP4O95707 220 aaKnown RBP5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 AP2A1O95782 977 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 IGSF6O95976 241 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 EGFP01133 1207 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 TUBBP07437 444 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 MMP2P08253 660 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 SERPINF2P08697 491 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 ZNF37AP17032 561 aaPredicted RBP5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 TNFRSF1AP19438 455 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 TPSB2P20231 275 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 MCM3P25205 808 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 TNFRSF8P28908 595 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 PLA2G5P39877 138 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 BUD31P41223 144 aaPredicted RBP5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 CD86P42081 329 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 MAPK9P45984 424 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 LMAN1P49257 510 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 DIO1P49895 249 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 CCT8P50990 548 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 TERF1P54274 439 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 PRKAA2P54646 552 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 GEMP55040 296 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 PLTPP55058 493 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 AP1S1P61966 158 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 SNRPD1P62314 119 aaKnown RBP5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 CDK16Q00536 496 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 PSG6Q00889 435 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 CAV1Q03135 178 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 RAD51Q06609 339 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 IHHQ14623 411 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 MORF4L2Q15014 288 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 RPS6KA2Q15349 733 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 TPSAB1Q15661 275 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 MLF2Q15773 248 aaPredicted RBP5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 MYLK3Q32MK0 819 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 CARD16Q5EG05 197 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 PCID2Q5JVF3 399 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 RNASEH2BQ5TBB1 312 aaKnown RBP5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 ANKRD22Q5VYY1 191 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 KCTD11Q693B1 232 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 LAIR1Q6GTX8 287 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 C22orf39Q6P5X5 142 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 NCEH1Q6PIU2 408 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 CCNI2Q6ZMN8 369 aaPredicted RBP5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 ZNF852Q6ZMS4 543 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 TPRG1Q6ZUI0 275 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 HOOK3Q86VS8 718 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 KLHDC8BQ8IXV7 354 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 UBALD2Q8IYN6 164 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 PNPLA1Q8N8W4 532 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 NAT8LQ8N9F0 302 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 EIF1ADQ8N9N8 165 aaKnown RBP5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 MCUQ8NE86 351 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 OR2AP1Q8NGE2 309 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 OR6Y1Q8NGX8 325 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 SPATA22Q8NHS9 363 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 HMGB4Q8WW32 186 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 FAM3CQ92520 227 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 ART4Q93070 314 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 TADA1Q96BN2 335 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 OXNAD1Q96HP4 312 aaPredicted RBP5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 GDAP1L1Q96MZ0 367 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 NUDCD1Q96RS6 583 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 SEMA3CQ99985 751 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 PARD6BQ9BYG5 372 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 FAM129AQ9BZQ8 928 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 TOR3AQ9H497 397 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 LRRC40Q9H9A6 602 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 NOD2Q9HC29 1040 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 EIF2B3Q9NR50 452 aaKnown RBP5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 VPS45Q9NRW7 570 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 WNT16Q9UBV4 365 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 SUN2Q9UH99 717 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 FAM153AQ9UHL3 310 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 RAB21Q9UL25 225 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 HS3ST3A1Q9Y663 406 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 REV3LO60673 3130 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 SHROOM3Q8TF72 1996 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 EDDM13A0A1B0GTR0 161 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 GXYLT2A0PJZ3 443 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 ANTXRLA6NF34 631 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 WASH3PC4AMC7 463 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 GJB3O75712 270 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 MT-CYBP00156 380 aaPredicted RBP5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 AGTP01019 485 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 APRTP07741 180 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 ALADP13716 330 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 HLA-EP13747 358 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 CD72P21854 359 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 ITPKBP27987 946 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 ADRA1AP35348 466 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 VSNL1P62760 191 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 MRPS21P82921 87 aaKnown RBP5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 SARNPP82979 210 aaKnown RBP5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 TXNL4AP83876 142 aaKnown RBP5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 SF3A3Q12874 501 aaKnown RBP eCLIP5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 DNASE1L3Q13609 305 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 ENPP2Q13822 863 aa5.81□□□□□ -1.48
NIFKP3-201ENST00000417799 ZNF234Q14588 700 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms