RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 RPA4Q13156 261 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 CBLBQ13191 982 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 DCAF10Q5QP82 559 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 C3orf62Q6ZUJ4 267 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 OTOAQ7RTW8 1153 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 RAB43Q86YS6 212 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 CNTN4Q8IWV2 1026 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 SLC22A15Q8IZD6 547 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 SKA2Q8WVK7 121 aaPredicted RBP17.26■□□□□ 0.35
VCP-202ENST00000417448 ASZ1Q8WWH4 475 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 CLIP3Q96DZ5 547 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 PANX3Q96QZ0 392 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 CD180Q99467 661 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 GPR21Q99679 349 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 AARSD1Q9BTE6 412 aaKnown RBP17.26■□□□□ 0.35
VCP-202ENST00000417448 TSSK1BQ9BXA7 367 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 NFU1Q9UMS0 254 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 NOVA2Q9UNW9 492 aaKnown RBP17.26■□□□□ 0.35
VCP-202ENST00000417448 ASF1AQ9Y294 204 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 BTRCQ9Y297 605 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 NIPBLQ6KC79 2804 aaeCLIP17.25■□□□□ 0.35
VCP-202ENST00000417448 ZBTB11O95625 1053 aaPredicted RBP17.25■□□□□ 0.35
VCP-202ENST00000417448 SNRPB2P08579 225 aaKnown RBP17.25■□□□□ 0.35
VCP-202ENST00000417448 STSP08842 583 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 GSTM1P09488 218 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 EDN3P14138 238 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 SAT1P21673 171 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 GSTM4Q03013 218 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 EFTUD2Q15029 972 aaKnown RBP eCLIP17.25■□□□□ 0.356e-8■■■□□ 17
VCP-202ENST00000417448 TMED2Q15363 201 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 CCSMST1Q4G0I0 132 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 KLHL35Q6PF15 583 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 STRA8Q7Z7C7 330 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 LMNTD2Q8IXW0 634 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 GSPT2Q8IYD1 628 aaKnown RBP17.25■□□□□ 0.35
VCP-202ENST00000417448 ZADH2Q8N4Q0 377 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 OR1L3Q8NH93 324 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 GRHL3Q8TE85 626 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 MRRFQ96E11 262 aaKnown RBP17.25■□□□□ 0.35
VCP-202ENST00000417448 CCDC68Q9H2F9 335 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 HRASLS2Q9NWW9 162 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 ZFATQ9P243 1243 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 VPS9D1Q9Y2B5 631 aa17.25■□□□□ 0.35
VCP-202ENST00000417448 TCRBV9S1A1TA0A576 114 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 OR6C74A6NCV1 312 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 F8W8V4 182 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 FAM155BO75949 473 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 SLCO2B1O94956 709 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 MCM3P25205 808 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 PTGER4P35408 488 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 BDKRB1P46663 353 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 CD151P48509 253 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 KPNA2P52292 529 aaKnown RBP17.24■□□□□ 0.35
VCP-202ENST00000417448 ADARP55265 1226 aaKnown RBP17.24■□□□□ 0.35
VCP-202ENST00000417448 ZNF385CQ66K41 422 aaPredicted RBP17.24■□□□□ 0.35
VCP-202ENST00000417448 TMEM151BQ8IW70 566 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 C2orf73Q8N5S3 287 aaPredicted RBP17.24■□□□□ 0.35
VCP-202ENST00000417448 GPATCH11Q8N954 259 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 CLEC1AQ8NC01 280 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 OR52E1Q8NGJ3 308 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 UHMK1Q8TAS1 419 aaKnown RBP17.24■□□□□ 0.35
VCP-202ENST00000417448 FBF1Q8TES7 1133 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 KIR3DX1Q9H7L2 352 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 ACTR5Q9H9F9 607 aaPredicted RBP17.24■□□□□ 0.35
VCP-202ENST00000417448 SOHLH2Q9NX45 425 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 NINJ2Q9NZG7 142 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 COLEC10Q9Y6Z7 277 aa17.24■□□□□ 0.35
VCP-202ENST00000417448 H3BMM5 538 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 DIAPH2O60879 1101 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 C1QAP02745 245 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 POLR2CP19387 275 aaPredicted RBP17.23■□□□□ 0.35
VCP-202ENST00000417448 FOXL2P58012 376 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 ART3Q13508 389 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 FRG1Q14331 258 aaKnown RBP17.23■□□□□ 0.35
VCP-202ENST00000417448 KLHL38Q2WGJ6 581 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 TMTC4Q5T4D3 741 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 CPNE9Q8IYJ1 553 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 FAR1Q8WVX9 515 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 ITLN2Q8WWU7 325 aaPredicted RBP17.23■□□□□ 0.35
VCP-202ENST00000417448 LCN9Q8WX39 176 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 TM9SF4Q92544 642 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 FER1L6-AS2Q96M78 137 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 IL17FQ96PD4 163 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 OLFM1Q99784 485 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 WDR77Q9BQA1 342 aaPredicted RBP17.23■□□□□ 0.35
VCP-202ENST00000417448 TRIM8Q9BZR9 551 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 ICKQ9UPZ9 632 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 KLF2Q9Y5W3 355 aaPredicted RBP17.23■□□□□ 0.35
VCP-202ENST00000417448 HEBP2Q9Y5Z4 205 aa17.23■□□□□ 0.35
VCP-202ENST00000417448 A0A1B0GUH1 482 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 BTN3A3O00478 584 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 IPO13O94829 963 aaKnown RBP17.22■□□□□ 0.35
VCP-202ENST00000417448 FAM153BP0C7A2 387 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 GBX1Q14549 363 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 KBTBD12Q3ZCT8 623 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 FAM153CQ494X1 144 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 HECTD2Q5U5R9 776 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 PAQR3Q6TCH7 311 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 KIAA0408Q6ZU52 694 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 CTAGE3PQ8IX95 158 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms