RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 OR1N1Q8NGS0 311 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 SMPDL3AQ92484 453 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 FAM136AQ96C01 138 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 CABS1Q96KC9 395 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 SLX1AQ9BQ83 275 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 PLCD4Q9BRC7 762 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 TRIM56Q9BRZ2 755 aaKnown RBP14.11□□□□□ -0.15
RPS28-201ENST00000417088 SYBUQ9NX95 663 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 CDC14AQ9UNH5 594 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 ABCA12Q86UK0 2595 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 LRBAP50851 2863 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 NSG1A0A0A6YYJ2 146 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 IGKV1-8A0A0C4DH67 115 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 H3BMM5 538 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 MYO1CO00159 1063 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 FFAR3O14843 346 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 GPR42O15529 346 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 USP1O94782 785 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 ESR1P03372 595 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 PRR35P0CG20 571 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 COX6A1P12074 109 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 CHRM3P20309 590 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 SOX11P35716 441 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 EMP2P54851 167 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 ADARP55265 1226 aaKnown RBP14.1□□□□□ -0.15
RPS28-201ENST00000417088 DSG2Q14126 1118 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 KCTD19Q17RG1 926 aaPredicted RBP14.1□□□□□ -0.15
RPS28-201ENST00000417088 C1QL3Q5VWW1 255 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 LRRC8BQ6P9F7 803 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 FAM180AQ6UWF9 173 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 PAQR7Q86WK9 346 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 GAS2L3Q86XJ1 694 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 TICAM1Q8IUC6 712 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 SPC24Q8NBT2 197 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 TCF12Q99081 682 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 PKP4Q99569 1192 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 TSGA10Q9BZW7 698 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 MRPS30Q9NP92 439 aaKnown RBP14.1□□□□□ -0.15
RPS28-201ENST00000417088 PLA2G3Q9NZ20 509 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 PTGFRNQ9P2B2 879 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 TRPC4Q9UBN4 977 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 SOX13Q9UN79 622 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 RUVBL1Q9Y265 456 aaKnown RBP14.1□□□□□ -0.15
RPS28-201ENST00000417088 CRYL1Q9Y2S2 319 aa14.1□□□□□ -0.15
RPS28-201ENST00000417088 A0A1W2PQ72 361 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 TCRBV7S3A2A0A539 114 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 IDSB3KWA1 339 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 PHF2O75151 1096 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 PSIP1O75475 530 aaKnown RBP14.09□□□□□ -0.15
RPS28-201ENST00000417088 SERPINA7P05543 415 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 STSP08842 583 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 RPA3P35244 121 aaPredicted RBP14.09□□□□□ -0.15
RPS28-201ENST00000417088 KCNJ1P48048 391 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 PER3P56645 1201 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 ARG2P78540 354 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 CDK16Q00536 496 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 ARHGAP19Q14CB8 494 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 ZRSR2Q15696 482 aaKnown RBP14.09□□□□□ -0.15
RPS28-201ENST00000417088 HKDC1Q2TB90 917 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 KLHL38Q2WGJ6 581 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 RNF187Q5TA31 235 aaPredicted RBP14.09□□□□□ -0.15
RPS28-201ENST00000417088 ZNF324BQ6AW86 544 aaPredicted RBP14.09□□□□□ -0.15
RPS28-201ENST00000417088 ZNF425Q6IV72 752 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 CENPUQ71F23 418 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 GSTA5Q7RTV2 222 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 ARHGEF39Q8N4T4 335 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 CSNK1A1LQ8N752 337 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 BCORP1Q8N888 145 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 AMER3Q8N944 861 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 BRIX1Q8TDN6 353 aaKnown RBP14.09□□□□□ -0.15
RPS28-201ENST00000417088 MVB12AQ96EY5 273 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 OR2A5Q96R48 311 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 YIPF2Q9BWQ6 316 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 OLAHQ9NV23 265 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 C14orf105Q9NVL8 296 aa14.09□□□□□ -0.15
RPS28-201ENST00000417088 IGHV1-45A0A0A0MS14 117 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 DYTNA2CJ06 578 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 ENO4A6NNW6 628 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 PFDN6O15212 129 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 PRPF4O43172 522 aaKnown RBP eCLIP14.08□□□□□ -0.16
RPS28-201ENST00000417088 FOXS1O43638 330 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 ZG16O60844 167 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 VPS26AO75436 327 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 JRKO75564 520 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 PKMP14618 531 aaKnown RBP14.08□□□□□ -0.16
RPS28-201ENST00000417088 TPSB2P20231 275 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 OGNP20774 298 aaKnown RBP14.08□□□□□ -0.16
RPS28-201ENST00000417088 FDXRP22570 491 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 CXCR2P25025 360 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 CDC25BP30305 580 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 SLC26A3P40879 764 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 TNFSF10P50591 281 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 PNLIPRP1P54315 467 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 EEF1A2Q05639 463 aaKnown RBP14.08□□□□□ -0.16
RPS28-201ENST00000417088 PRDX1Q06830 199 aaKnown RBP14.08□□□□□ -0.16
RPS28-201ENST00000417088 TSTA3Q13630 321 aaPredicted RBP14.08□□□□□ -0.16
RPS28-201ENST00000417088 KCNJ11Q14654 390 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 TPSAB1Q15661 275 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 GARNL3Q5VVW2 1013 aa14.08□□□□□ -0.16
RPS28-201ENST00000417088 ICE2Q659A1 982 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms