RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 PNLIPP16233 465 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 UGT2B7P16662 529 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 NPPBP16860 134 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 DRD4P21917 467 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 CDH3P22223 829 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 PSMB5P28074 263 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 ALDH4A1P30038 563 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 GPR3P46089 330 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 CAPZBP47756 277 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 CCR8P51685 355 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 ARFIP2P53365 341 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 ERVPABLB-1P60509 514 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 SH3BP2P78314 561 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 GPLD1P80108 840 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 PRDX1Q06830 199 aaKnown RBP8.1□□□□□ -1.11
RBM39-208ENST00000416108 DOC2AQ14183 400 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 SLBPQ14493 270 aaKnown RBP eCLIP8.1□□□□□ -1.11
RBM39-208ENST00000416108 TBCCQ15814 346 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 PDCD2Q16342 344 aaPredicted RBP8.1□□□□□ -1.11
RBM39-208ENST00000416108 CSRP2Q16527 193 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 CPSF6Q16630 551 aaKnown RBP eCLIP8.1□□□□□ -1.11
RBM39-208ENST00000416108 IMPG1Q17R60 797 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 GKAP1Q5VSY0 366 aaPredicted RBP8.1□□□□□ -1.11
RBM39-208ENST00000416108 CES4AQ5XG92 561 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 KANK2Q63ZY3 851 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 ATG9BQ674R7 924 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 CLEC6AQ6EIG7 209 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 IRGCQ6NXR0 463 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 MED27Q6P2C8 311 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 NXPE4Q6UWF7 544 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 PRR23CQ6ZRP0 262 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 ACAD11Q709F0 780 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 SPATA21Q7Z572 469 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 ADGRF3Q8IZF5 1079 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 DCBLD1Q8N8Z6 715 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 FAM181AQ8N9Y4 354 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 L3MBTL4Q8NA19 623 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 OR2L3Q8NG85 312 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 OR2A1Q8NGT9 310 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 BCAS4Q8TDM0 211 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 RHBDD1Q8TEB9 315 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 TWIST2Q8WVJ9 160 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 SELENOMQ8WWX9 145 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 RSC1A1Q92681 617 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 CCDC74AQ96AQ1 378 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 THOC1Q96FV9 657 aaKnown RBP8.1□□□□□ -1.11
RBM39-208ENST00000416108 CNDP2Q96KP4 475 aaKnown RBP8.1□□□□□ -1.11
RBM39-208ENST00000416108 ELAC2Q9BQ52 826 aaKnown RBP8.1□□□□□ -1.11
RBM39-208ENST00000416108 EHD1Q9H4M9 534 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 TMEM184CQ9NVA4 438 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 KLHL14Q9P2G3 628 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 ANKMY1Q9P2S6 941 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 HAO1Q9UJM8 370 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 SNX7Q9UNH6 387 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 APOBEC2Q9Y235 224 aaKnown RBP8.1□□□□□ -1.11
RBM39-208ENST00000416108 RNF11Q9Y3C5 154 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 PCDHGA11Q9Y5H2 935 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 USH1CQ9Y6N9 552 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 CROCCQ5TZA2 2017 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 CACNA1HO95180 2353 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 A0A0G2JND7 137 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 A0A1W2PPV9 198 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 EME2A4GXA9 379 aaPredicted RBP8.09□□□□□ -1.11
RBM39-208ENST00000416108 ANKDD1BA6NHY2 528 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 PPP6CO00743 305 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 UBFD1O14562 309 aaKnown RBP8.09□□□□□ -1.11
RBM39-208ENST00000416108 FFAR3O14843 346 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 GPR42O15529 346 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 RGS14O43566 566 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 DIAPH2O60879 1101 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 ULK1O75385 1050 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 FGF4P08620 206 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 VARSP26640 1264 aaKnown RBP8.09□□□□□ -1.11
RBM39-208ENST00000416108 PRDX3P30048 256 aaKnown RBP8.09□□□□□ -1.11
RBM39-208ENST00000416108 PEBP1P30086 187 aaKnown RBP8.09□□□□□ -1.11
RBM39-208ENST00000416108 SERPINB1P30740 379 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 ARRB2P32121 409 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 ARL4DP49703 201 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 AQP5P55064 265 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 SLC14A1Q13336 389 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 DDX39BQ13838 428 aaKnown RBP8.09□□□□□ -1.11
RBM39-208ENST00000416108 RBBP5Q15291 538 aaKnown RBP8.09□□□□□ -1.11
RBM39-208ENST00000416108 ZRSR2Q15696 482 aaKnown RBP8.09□□□□□ -1.11
RBM39-208ENST00000416108 SLC5A12Q1EHB4 618 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 ZXDCQ2QGD7 858 aaPredicted RBP8.09□□□□□ -1.11
RBM39-208ENST00000416108 AMZ1Q400G9 498 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 SGO1Q5FBB7 561 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 CATSPEREQ5SY80 951 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 C10orf62Q5T681 223 aaPredicted RBP8.09□□□□□ -1.11
RBM39-208ENST00000416108 LETMD1Q6P1Q0 360 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 SPESP1Q6UW49 350 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 SLCO4C1Q6ZQN7 724 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 ZNF438Q7Z4V0 828 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 PLXDC1Q8IUK5 500 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 ANKS4BQ8N8V4 417 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 Q8N9G6 341 aaPredicted RBP8.09□□□□□ -1.11
RBM39-208ENST00000416108 TTLQ8NG68 377 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 ZNF473Q8WTR7 871 aaKnown RBP8.09□□□□□ -1.11
RBM39-208ENST00000416108 NCSTNQ92542 709 aa8.09□□□□□ -1.11
RBM39-208ENST00000416108 ZDHHC12Q96GR4 267 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms