RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 CFAP20Q9Y6A4 193 aaKnown RBP16.69■□□□□ 0.26
HDAC10-203ENST00000415993 TRBV5-3A0A0A0MS03 114 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 KLHL33A6NCF5 533 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 SHISA7A6NL88 538 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 KELP23276 732 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 RPL10P27635 214 aaKnown RBP16.68■□□□□ 0.26
HDAC10-203ENST00000415993 MTPNP58546 118 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 IRAK1BP1Q5VVH5 260 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 CAPRIN2Q6IMN6 1127 aaKnown RBP16.68■□□□□ 0.26
HDAC10-203ENST00000415993 MED27Q6P2C8 311 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 LAS2Q8IYD9 372 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 CANT1Q8WVQ1 401 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 SLC5A11Q8WWX8 675 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 MUC13Q9H3R2 512 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 C8orf33Q9H7E9 229 aaPredicted RBP16.68■□□□□ 0.26
HDAC10-203ENST00000415993 PREBQ9HCU5 417 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 FZD4Q9ULV1 537 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 WDR37Q9Y2I8 494 aa16.68■□□□□ 0.26
HDAC10-203ENST00000415993 TBC1D3DA0A087WVF3 549 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 TBC1D3IA0A087WXS9 549 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 TBC1D3EA0A087X179 549 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 TBC1D3KA0A087X1G2 549 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 TBC1D3FA6NER0 549 aaPredicted RBP16.67■□□□□ 0.26
HDAC10-203ENST00000415993 PRR19A6NJB7 356 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 TBC1D3LB9A6J9 549 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 TBC1D3HP0C7X1 549 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 C1GALT1C1LP0DN25 315 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 HTR1EP28566 365 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 MAT2AP31153 395 aaKnown RBP16.67■□□□□ 0.26
HDAC10-203ENST00000415993 AQP4P55087 323 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 PPP2CBP62714 309 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 PPP2CAP67775 309 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 MRPS21P82921 87 aaKnown RBP16.67■□□□□ 0.26
HDAC10-203ENST00000415993 TSTA3Q13630 321 aaPredicted RBP16.67■□□□□ 0.26
HDAC10-203ENST00000415993 TBC1D3GQ6DHY5 549 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 TBC1D3CQ6IPX1 549 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 CHST15Q7LFX5 561 aaPredicted RBP16.67■□□□□ 0.26
HDAC10-203ENST00000415993 TBC1D3Q8IZP1 549 aaPredicted RBP16.67■□□□□ 0.26
HDAC10-203ENST00000415993 SIPA1Q96FS4 1042 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 MRGPRX1Q96LB2 322 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 EFCAB11Q9BUY7 163 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 EBPLQ9BY08 206 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 SPNS1Q9H2V7 528 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 IKZF5Q9H5V7 419 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 FZD3Q9NPG1 666 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 SLC6A13Q9NSD5 602 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 CCM2LQ9NUG4 571 aaPredicted RBP16.67■□□□□ 0.26
HDAC10-203ENST00000415993 ARMC1Q9NVT9 282 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 LIMD1Q9UGP4 676 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 DYRK1BQ9Y463 629 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 ZNF839A8K0R7 811 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 PI15O43692 258 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 STAMBPO95630 424 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 PAX7P23759 505 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 RAE1P78406 368 aaKnown RBP16.67■□□□□ 0.26
HDAC10-203ENST00000415993 SLBPQ14493 270 aaKnown RBP eCLIP16.67■□□□□ 0.26
HDAC10-203ENST00000415993 NXPE4Q6UWF7 544 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 GOLM1Q8NBJ4 401 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 FAM110BQ8TC76 370 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 SETD7Q8WTS6 366 aaKnown RBP16.67■□□□□ 0.26
HDAC10-203ENST00000415993 BTBD1Q9H0C5 482 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 CD93Q9NPY3 652 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 ACSL5Q9ULC5 683 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 RUVBL1Q9Y265 456 aaKnown RBP16.67■□□□□ 0.26
HDAC10-203ENST00000415993 MAN2B2Q9Y2E5 1009 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 SNX13Q9Y5W8 968 aa16.67■□□□□ 0.26
HDAC10-203ENST00000415993 PIPSLA2A3N6 862 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 LRATO95237 230 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 MTHFD1P11586 935 aaKnown RBP16.66■□□□□ 0.26
HDAC10-203ENST00000415993 PCNAP12004 261 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 ACP5P13686 325 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 HOXB9P17482 250 aaPredicted RBP16.66■□□□□ 0.26
HDAC10-203ENST00000415993 PTPN6P29350 595 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 CLCNKAP51800 687 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 OR4D2P58180 307 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 MTAPQ13126 283 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 SF1Q15637 639 aaKnown RBP16.66■□□□□ 0.26
HDAC10-203ENST00000415993 ANO7Q6IWH7 933 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 TMEM92Q6UXU6 159 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 USP30Q70CQ3 517 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 CHTF18Q8WVB6 975 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 DNASE1L2Q92874 299 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 ZNF583Q96ND8 569 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 TRIM15Q9C019 465 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 TDRKHQ9Y2W6 561 aaKnown RBP16.66■□□□□ 0.26
HDAC10-203ENST00000415993 TCRBV5S2A0A599 114 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 KANSL1LA0AUZ9 987 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 LATO43561 262 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 B3GALT4O96024 378 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 NCK1P16333 377 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 PRPS1L1P21108 318 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 HRH2P25021 359 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 S100A3P33764 101 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 C21orf58P58505 322 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 RPS13P62277 151 aaKnown RBP16.66■□□□□ 0.26
HDAC10-203ENST00000415993 ACSM2AQ08AH3 577 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 ARHGAP19Q14CB8 494 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 GRAMD1BQ3KR37 738 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 LRIF1Q5T3J3 769 aa16.66■□□□□ 0.26
HDAC10-203ENST00000415993 ACSM2BQ68CK6 577 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms