RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 CAPN5O15484 640 aaPredicted RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 RNGTTO60942 597 aaKnown RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 SIX3O95343 332 aaPredicted RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 ECDO95905 644 aaPredicted RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 HMGN1P05114 100 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 C1GALT1C1LP0DN25 315 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 NRLP54845 237 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 MGAT3Q09327 533 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 ZNF763Q0D2J5 394 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 ZIK1Q3SY52 487 aaPredicted RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 GOLM1Q8NBJ4 401 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 TMIEQ8NEW7 156 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 NMD3Q96D46 503 aaKnown RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 KXD1Q9BQD3 176 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 PITHD1Q9GZP4 211 aaPredicted RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 KCNN2Q9H2S1 579 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 RERGLQ9H628 205 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 SLC24A3Q9HC58 644 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 ZNF358Q9NW07 568 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 IL7RP16871 459 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 IVDP26440 423 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 RALGDSQ12967 914 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 TMEM145Q8NBT3 493 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 FAM98AQ8NCA5 519 aaKnown RBP11.64□□□□□ -0.55
PTPRF-205ENST00000414879 DPYSL5Q9BPU6 564 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 OSBPL7Q9BZF2 842 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 ACTR3BQ9P1U1 418 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 PTGFRNQ9P2B2 879 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 RAPGEFL1Q9UHV5 662 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 MAN2B2Q9Y2E5 1009 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 SH3GLB1Q9Y371 365 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 PCDHGB7Q9Y5F8 929 aa11.64□□□□□ -0.55
PTPRF-205ENST00000414879 KLK3P07288 261 aaPredicted RBP11.63□□□□□ -0.55
PTPRF-205ENST00000414879 MASP1P48740 699 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 CLDN19Q8N6F1 224 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 ANKRD31Q8N7Z5 1873 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 ZNF671Q8TAW3 534 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 ANKRD49Q8WVL7 239 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 PIH1D2Q8WWB5 315 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 METTL2AQ96IZ6 378 aaKnown RBP11.63□□□□□ -0.55
PTPRF-205ENST00000414879 DGAT2Q96PD7 388 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 KCNH6Q9H252 994 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 UGDHO60701 494 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 CCDC159P0C7I6 412 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 SRCP12931 536 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 ITGB7P26010 798 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 CASRP41180 1078 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 GRK6P43250 576 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 GSSP48637 474 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 RBBP4Q09028 425 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 SCARB2Q14108 478 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 MZT2BQ6NZ67 158 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 OR8H2Q8N162 312 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 PDPRQ8NCN5 879 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 MYRFLQ96LU7 910 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 CLSTN3Q9BQT9 956 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 SMG9Q9H0W8 520 aaKnown RBP11.63□□□□□ -0.55
PTPRF-205ENST00000414879 KLHL1Q9NR64 748 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 ZDHHC2Q9UIJ5 367 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 RGS10O43665 173 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 NBNO60934 754 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 SAGP10523 405 aaPredicted RBP11.63□□□□□ -0.55
PTPRF-205ENST00000414879 CCKBRP32239 447 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 RABIFP47224 123 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 COX10Q12887 443 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 TAZQ16635 292 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 DCBLD1Q8N8Z6 715 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 C5orf34Q96MH7 638 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 AK5Q9Y6K8 562 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 CLCA3PQ9Y6N3 262 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 B4DGG1 531 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 GADD45GO95257 159 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 CFIP05156 583 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 CA3P07451 260 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 HLA-EP13747 358 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 ADGRE1Q14246 886 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 PUS10Q3MIT2 529 aaKnown RBP11.63□□□□□ -0.55
PTPRF-205ENST00000414879 HSF5Q4G112 596 aaPredicted RBP11.63□□□□□ -0.55
PTPRF-205ENST00000414879 PIM3Q86V86 326 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 HEATR4Q86WZ0 1026 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 IGDCC3Q8IVU1 814 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 IPCEF1Q8WWN9 437 aaPredicted RBP11.63□□□□□ -0.55
PTPRF-205ENST00000414879 ZUFSPQ96AP4 578 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 SERINC1Q9NRX5 453 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 C14orf105Q9NVL8 296 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 PCDHGB1Q9Y5G3 927 aa11.63□□□□□ -0.55
PTPRF-205ENST00000414879 ENO4A6NNW6 628 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 NDUFS4O43181 175 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 TFPIP10646 304 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 KLHL22Q53GT1 634 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 NPAS3Q8IXF0 933 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 NPWQ8N729 165 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 FCRL3Q96P31 734 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-205ENST00000414879 SLC35A5Q9BS91 424 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 Q9N2J8 555 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 MKKSQ9NPJ1 570 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-205ENST00000414879 ZC4H2Q9NQZ6 224 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 DMTF1Q9Y222 760 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 TTC24A2A3L6 582 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms