RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 WDR83Q9BRX9 315 aaKnown RBP10.73□□□□□ -0.69
RFFL-204ENST00000414419 PCBD2Q9H0N5 130 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 PLAC1Q9HBJ0 212 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 SLC6A20Q9NP91 592 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 CCDC177Q9NQR7 707 aaPredicted RBP10.73□□□□□ -0.69
RFFL-204ENST00000414419 MOCS1Q9NZB8 636 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 G3BP2Q9UN86 482 aaKnown RBP10.73□□□□□ -0.69
RFFL-204ENST00000414419 PDE10AQ9Y233 779 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 PTRH2Q9Y3E5 179 aaKnown RBP10.73□□□□□ -0.69
RFFL-204ENST00000414419 CFAP46Q8IYW2 2715 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 LOC105369274A0A096LPK9 316 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 LOC102723532A0A0G2JNH3 316 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 FITM1A5D6W6 292 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 PEX12O00623 359 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 TXNDC9O14530 226 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 PLA2G2AP14555 144 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 EZRP15311 586 aaKnown RBP10.72□□□□□ -0.69
RFFL-204ENST00000414419 FDXRP22570 491 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 CCND1P24385 295 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 HRH2P25021 359 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 IMPA1P29218 277 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 OTX2P32243 289 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 CCL11P51671 97 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 YBX1P67809 324 aaKnown RBP10.72□□□□□ -0.69
RFFL-204ENST00000414419 NFKB2Q00653 900 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 MUM1Q2TAK8 710 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 FAM69BQ5VUD6 431 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 PRAMEF13Q5VWM6 474 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 DUPD1Q68J44 220 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 C8orf74Q6P047 294 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 FBXO42Q6P3S6 717 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 ATG14Q6ZNE5 492 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 MED25Q71SY5 747 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 RNF44Q7L0R7 432 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 CCDC25Q86WR0 208 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 SPNS2Q8IVW8 549 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 OR4N4Q8N0Y3 316 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 TMEM102Q8N9M5 508 aaPredicted RBP10.72□□□□□ -0.69
RFFL-204ENST00000414419 ADAMTS17Q8TE56 1095 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 PTERQ96BW5 349 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 CABS1Q96KC9 395 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 ZNF285Q96NJ3 590 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 ATG10Q9H0Y0 220 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 ING2Q9H160 280 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 ARL15Q9NXU5 204 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 STOX2Q9P2F5 926 aaPredicted RBP10.72□□□□□ -0.69
RFFL-204ENST00000414419 CDC23Q9UJX2 597 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 TLK1Q9UKI8 766 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 ADAMTS6Q9UKP5 1117 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 BAHCC1Q9P281 2608 aa10.72□□□□□ -0.69
RFFL-204ENST00000414419 TNRC6AQ8NDV7 1962 aaKnown RBP10.72□□□□□ -0.69
RFFL-204ENST00000414419 FAM95CA0A1B0GW59 222 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 H0YGG7 62 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 H7BY64 318 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 J3QKU1 62 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 NRP2O60462 931 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 KLF7O75840 302 aaPredicted RBP10.71□□□□□ -0.69
RFFL-204ENST00000414419 DNAJB5O75953 348 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 IGHEP01854 428 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 ALBP02768 609 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 SSTR1P30872 391 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 OR1D4P47884 311 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 AP1S2P56377 157 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 ARF3P61204 181 aaPredicted RBP10.71□□□□□ -0.69
RFFL-204ENST00000414419 TBPL1P62380 186 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 CHAF1BQ13112 559 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 CBLBQ13191 982 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 NAE1Q13564 534 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 TCTN3Q6NUS6 607 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 MRPL14Q6P1L8 145 aaKnown RBP10.71□□□□□ -0.69
RFFL-204ENST00000414419 AGTRAPQ6RW13 159 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 C3orf62Q6ZUJ4 267 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 OVCH1Q7RTY7 1134 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 ZNF572Q7Z3I7 529 aaPredicted RBP10.71□□□□□ -0.69
RFFL-204ENST00000414419 ZC3HC1Q86WB0 502 aaKnown RBP10.71□□□□□ -0.69
RFFL-204ENST00000414419 PAQR7Q86WK9 346 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 NKAPQ8N5F7 415 aaKnown RBP10.71□□□□□ -0.69
RFFL-204ENST00000414419 CSNK1A1LQ8N752 337 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 OR2Y1Q8NGV0 311 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 ATL1Q8WXF7 558 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 COL26A1Q96A83 441 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 FKBP10Q96AY3 582 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 PRAP1Q96NZ9 151 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 OLFM1Q99784 485 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 SLC25A23Q9BV35 468 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 RHOJQ9H4E5 214 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 ZNF304Q9HCX3 659 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 ENAMQ9NRM1 1142 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 TMEM184CQ9NVA4 438 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 SCN3AQ9NY46 2000 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 GRHL1Q9NZI5 618 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 CDC14AQ9UNH5 594 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 TP53TG5Q9Y2B4 290 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 PSAT1Q9Y617 370 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 MAU2Q9Y6X3 613 aa10.71□□□□□ -0.69
RFFL-204ENST00000414419 NUP210LQ5VU65 1888 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 IGKV1-8A0A0C4DH67 115 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 PRPF4O43172 522 aaKnown RBP eCLIP10.7□□□□□ -0.7
RFFL-204ENST00000414419 SUV39H1O43463 412 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 GUCA1CO95843 209 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms