RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 G2E3Q7L622 706 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 RASGEF1AQ8N9B8 481 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 ADAD2Q8NCV1 583 aaKnown RBP3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 OR4K1Q8NGD4 311 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 OR5AP2Q8NGF4 316 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 KIF18AQ8NI77 898 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 MRPS27Q92552 414 aaKnown RBP3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 THOC1Q96FV9 657 aaKnown RBP3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 GMPPAQ96IJ6 420 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 FAM71F1Q96KD3 344 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 RMDN2Q96LZ7 410 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 FER1L6-AS2Q96M78 137 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 ZNF558Q96NG5 402 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 FZD8Q9H461 694 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 ATP13A3Q9H7F0 1226 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 FGF22Q9HCT0 170 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 DNAJC4Q9NNZ3 241 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 CHST11Q9NPF2 352 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 TMEM181Q9P2C4 612 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 ERRFI1Q9UJM3 462 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 PYGO1Q9Y3Y4 419 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 IQGAP3Q86VI3 1631 aa3.37□□□□□ -1.87
HMGB1P11-201ENST00000413899 PPRC1Q5VV67 1664 aaKnown RBP3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 ABCC5O15440 1437 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 SETD5Q9C0A6 1442 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 BCORL1Q5H9F3 1711 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 IFT172Q9UG01 1749 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 PZPP20742 1482 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 MBD5Q9P267 1494 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 ZFYVE16Q7Z3T8 1539 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 ARAP3Q8WWN8 1544 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 SYCP2Q9BX26 1530 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 A0A087WV48 116 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 MEIOCA2RUB1 952 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 DIAPH2O60879 1101 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 CDK2AP2O75956 126 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 KRT33AO76009 404 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 ACSL3O95573 720 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 APOA4P06727 396 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 HMBSP08397 361 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 RNF224P0DH78 156 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 RPL21P46778 160 aaKnown RBP3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 UBASH3AP57075 661 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 RRS1Q15050 365 aaKnown RBP3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 CTU2Q2VPK5 515 aaKnown RBP3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 SLC25A53Q5H9E4 307 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 C6orf136Q5SQH8 315 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 CEP85LQ5SZL2 805 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 ADAMTSL4-AS1Q5T5F5 129 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 ABI3BPQ7Z7G0 1075 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 LGI2Q8N0V4 545 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 RYBPQ8N488 228 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 KBTBD8Q8NFY9 601 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 OR10Q1Q8NGQ4 319 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 OR13C3Q8NGS6 347 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 VANGL1Q8TAA9 524 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 MRGPRDQ8TDS7 321 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 RAB3IPQ96QF0 476 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 MAP3K3Q99759 626 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 SLC2A11Q9BYW1 496 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 ZMYND12Q9H0C1 365 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 THAP2Q9H0W7 228 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 WDR13Q9H1Z4 485 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 GSN-AS1Q9NRJ2 163 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 ATAD3AQ9NVI7 634 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 RNF186Q9NXI6 227 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 RNF17Q9BXT8 1623 aaKnown RBP3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 MTUS2Q5JR59 1369 aa3.36□□□□□ -1.87
HMGB1P11-201ENST00000413899 ANXA2P2A6NMY6 339 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 C2CD4DB7Z1M9 353 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 TCERG1O14776 1098 aaKnown RBP3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 ZFAND5O76080 213 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 GCNT1Q02742 428 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 TFCP2Q12800 502 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 SQLEQ14534 574 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 FAM174BQ3ZCQ3 159 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 OR4A47Q6IF82 309 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 UGT3A1Q6NUS8 523 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 ADCK2Q7Z695 626 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 NIPA2Q8N8Q9 360 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 IQUBQ8NA54 791 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 TMEM178AQ8NBL3 297 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 Q8NFD4 153 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 CTCFLQ8NI51 663 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 HCAR2Q8TDS4 363 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 PROX1Q92786 737 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 C10orf90Q96M02 699 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 SPATA33Q96N06 139 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 EDEM3Q9BZQ6 932 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 FN3KQ9H479 309 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 INTS10Q9NVR2 710 aaKnown RBP3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 OR6C2Q9NZP2 312 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 TXNDC16Q9P2K2 825 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 POLLQ9UGP5 575 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 KCNK7Q9Y2U2 307 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 E9PCH4 1651 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 CEP152O94986 1710 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 RICTORQ6R327 1708 aa3.35□□□□□ -1.87
HMGB1P11-201ENST00000413899 KIDINS220Q9ULH0 1771 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms