RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ODF2LQ9ULJ1 636 aa4.41□□□□□ -1.7
HMGB3P31-201ENST00000413333 ISY1Q9ULR0 285 aaKnown RBP4.41□□□□□ -1.7
HMGB3P31-201ENST00000413333 GPR132Q9UNW8 380 aa4.41□□□□□ -1.7
HMGB3P31-201ENST00000413333 PA2G4Q9UQ80 394 aaKnown RBP4.41□□□□□ -1.7
HMGB3P31-201ENST00000413333 KIAA1217Q5T5P2 1943 aa4.4□□□□□ -1.7
HMGB3P31-201ENST00000413333 ILVBLA1L0T0 632 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 GTPBP10A4D1E9 387 aaKnown RBP4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 TMEM150CB9EJG8 249 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 CCL24O00175 119 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 ATP9AO75110 1047 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 PRKRAO75569 313 aaKnown RBP4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 PIGNO95427 931 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 SP9P0CG40 484 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 CYP2A7P20853 494 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 CA4P22748 312 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 CSTF2P33240 577 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 MAGEB1P43366 347 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 HOXA1P49639 335 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 SERPINH1P50454 418 aaKnown RBP4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 PITX1P78337 314 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 AKAP17AQ02040 695 aaKnown RBP4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 IL10RBQ08334 325 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 GAGE5Q13069 117 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 GAGE6Q13070 117 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 IZUMO4Q1ZYL8 232 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 AARDQ4LEZ3 155 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 LRRC38Q5VT99 294 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 C9orf57Q5W0N0 161 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 NADSYN1Q6IA69 706 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 TATDN1Q6P1N9 297 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 CNSTQ6PJW8 725 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 MAPKAPK5-AS1Q8N8E1 139 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 MAB21L3Q8N8X9 362 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 KBTBD3Q8NAB2 608 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 NEK11Q8NG66 645 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 PHLDA1Q8WV24 401 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 CKAP2Q8WWK9 683 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 BCL2L2Q92843 193 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 SLC47A1Q96FL8 570 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 C5orf30Q96GV9 206 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 GDAP1L1Q96MZ0 367 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 DUX5Q96PT3 197 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 TMEM237Q96Q45 408 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 GAL3ST4Q96RP7 486 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZNF559Q9BR84 538 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 ATG101Q9BSB4 218 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 LAT2Q9GZY6 243 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 ACTL8Q9H568 366 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 C6orf106Q9H6K1 298 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 SDR39U1Q9NRG7 319 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 ECHDC1Q9NTX5 307 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 PDRG1Q9NUG6 133 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 FETUBQ9UGM5 382 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 ACAD8Q9UKU7 415 aa4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 GREB1LQ9C091 1923 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P31-201ENST00000413333 LOC101059948A0A1B0GTJ6 334 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 A0A1W2PS18 150 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 C5orf51A6NDU8 294 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 C2orf81A6NN90 581 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 C17orf105B2RV13 164 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 XPNPEP2O43895 674 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 VEGFDO43915 354 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 DDHD2O94830 711 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 PPP1R3DO95685 299 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 DLATP10515 647 aaKnown RBP4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 CETPP11597 493 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 PLA2G2AP14555 144 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 OR3A1P47881 315 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 TRAP1Q12931 704 aaKnown RBP4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 SQLEQ14534 574 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 MAPK11Q15759 364 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 ETFRF1Q6IPR1 90 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 TTC27Q6P3X3 843 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 PRSS57Q6UWY2 283 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 ANKRD33Q7Z3H0 272 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 SIAH3Q8IW03 269 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 METTL27Q8N6F8 245 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 KLHDC1Q8N7A1 406 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 AMER3Q8N944 861 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 DMBX1Q8NFW5 382 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 KBTBD8Q8NFY9 601 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 CD101Q93033 1021 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 THOC3Q96J01 351 aaKnown RBP4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 NDNQ99608 321 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 RHNO1Q9BSD3 238 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 IDI2Q9BXS1 227 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 SDCBP2Q9H190 292 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 TFB2MQ9H5Q4 396 aaKnown RBP4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 EVA1AQ9H8M9 152 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 RNF121Q9H920 327 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 FGF21Q9NSA1 209 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 P4HTMQ9NXG6 502 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 TNNQ9UQP3 1299 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 CHKBQ9Y259 395 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 PCDHGB1Q9Y5G3 927 aa4.39□□□□□ -1.71
HMGB3P31-201ENST00000413333 A0A1W2PN81 502 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 CACNB4O00305 520 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 FGF5P12034 268 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 DARSP14868 501 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms