RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 SMIM11AP58511 58 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 PARP15Q460N3 678 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 MSANTD2Q6P1R3 559 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 CTU1Q7Z7A3 348 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 KRTCAP2Q8N6L1 136 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 UXS1Q8NBZ7 420 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 OR52B6Q8NGF0 335 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 PROKR1Q8TCW9 393 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 ERMAPQ96PL5 475 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 TTPALQ9BTX7 342 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 TTLL2Q9BWV7 592 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 EBPLQ9BY08 206 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 EVLQ9UI08 416 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 ZNF451Q9Y4E5 1061 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 TNNI3P19429 210 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 BLVRAP53004 296 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 HSPA14Q0VDF9 509 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 C11orf88Q6PI97 169 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 UBXN10Q96LJ8 280 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 TREX1Q9NSU2 369 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 FKBP14Q9NWM8 211 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 NKIRAS2Q9NYR9 191 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 PCTPQ9UKL6 214 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 SPO11Q9Y5K1 396 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 ARFGEF1Q9Y6D6 1849 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 A0A1W2PQ09 198 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 TCRBV5S2A0A599 114 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 STX11O75558 287 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 SLC25A14O95258 325 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 PRKACAP17612 351 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 PTGER3P43115 390 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 RPS7P62081 194 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 RPA4Q13156 261 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 SIGIRRQ6IA17 410 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 KIF18BQ86Y91 864 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 MFSD4AQ8N468 514 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 CCDC120Q96HB5 630 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 MAPKAP1Q9BPZ7 522 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 PPIL3Q9H2H8 161 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 PCDHGB2Q9Y5G2 931 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 COL1A2P08123 1366 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 J3KR12 359 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 IRF1P10914 325 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 KDELR2P33947 212 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 RECQLP46063 649 aaPredicted RBP13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 ABRQ12979 859 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 GCNT6Q5T4J0 391 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 DNAJA4Q8WW22 397 aaPredicted RBP13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 WACQ9BTA9 647 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 LTB4R2Q9NPC1 389 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 USP3Q9Y6I4 520 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 SMIM30A4D0T7 59 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 ISM1B1AKI9 464 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 POMCP01189 267 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 PKLRP30613 574 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 RGS6P49758 472 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 IL10RBQ08334 325 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 USP45Q70EL2 814 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 OSTM1Q86WC4 334 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 GPR156Q8NFN8 814 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 KHSRPQ92945 711 aaKnown RBP eCLIP13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 NACC2Q96BF6 587 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 SLC38A2Q96QD8 506 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 MBOAT4Q96T53 435 aa13.52□□□□□ -0.24
CLTCL1-201ENST00000412649 MAFKO60675 156 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 MSL3P1P0C860 447 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 STOMP27105 288 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 PPP2R1BP30154 601 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 HTR6P50406 440 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 PPP2R2BQ00005 443 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 GTDC1Q4AE62 458 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 UBE2Q1Q7Z7E8 422 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 UBQLNLQ8IYU4 475 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 UFD1Q92890 307 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 SPATA9Q9BWV2 254 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 CIPCQ9C0C6 399 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 TNFRSF12AQ9NP84 129 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 PAK6Q9NQU5 681 aaPredicted RBP13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 AGO1Q9UL18 857 aaKnown RBP13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 PCDHB5Q9Y5E4 795 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 COL14A1Q05707 1796 aaKnown RBP13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 TARM1B6A8C7 271 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 OPN1SWP03999 348 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 PRDX3P30048 256 aaKnown RBP13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 CSTF2P33240 577 aaKnown RBP eCLIP13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 ADCYAP1R1P41586 468 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 PTSQ03393 145 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 SUZ12Q15022 739 aaKnown RBP13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 DUOXA1Q1HG43 343 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 VMACQ2NL98 169 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 HKDC1Q2TB90 917 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 FAM151BQ6UXP7 276 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 DEF8Q6ZN54 512 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 ASB18Q6ZVZ8 466 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 GDPD1Q8N9F7 314 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 COPS8Q99627 209 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 HTATIP2Q9BUP3 242 aa13.52□□□□□ -0.25
CLTCL1-201ENST00000412649 IGKV6D-21A0A0A0MT36 114 aa13.51□□□□□ -0.25
CLTCL1-201ENST00000412649 TLR4O00206 839 aa13.51□□□□□ -0.25
CLTCL1-201ENST00000412649 PEX10O60683 326 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms