RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-229	ENST00000411527	FDFT1	P37268	417 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CCNF	P41002	786 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ARF3	P61204	181 aa	Predicted RBP	13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	DSG2	Q14126	1118 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	FASTK	Q14296	549 aa	Known RBP	13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PRTG	Q2VWP7	1150 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	OTOA	Q7RTW8	1153 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PPHLN1	Q8NEY8	458 aa	Known RBP	13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	DNAJB8	Q8NHS0	232 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MAGEC3	Q8TD91	643 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ATG4A	Q8WYN0	398 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PEX13	Q92968	403 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	FOPNL	Q96NB1	174 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	P2RY12	Q9H244	342 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CHRAC1	Q9NRG0	131 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	RIC8B	Q9NVN3	520 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SEC14L3	Q9UDX4	400 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SH3BGRL2	Q9UJC5	107 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	GNPTG	Q9UJJ9	305 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	REXO2	Q9Y3B8	237 aa	Known RBP	13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527		A0A1W2PQ72	361 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MIF4GD	A9UHW6	222 aa	Known RBP	13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PRPF4	O43172	522 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	NDUFS3	O75489	264 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ITGAM	P11215	1152 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CA7	P43166	264 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	EMP3	P54852	163 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	NAA25	Q14CX7	972 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MTFR2	Q6P444	385 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	RIPOR1	Q6ZS17	1223 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	GDF7	Q7Z4P5	450 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ZNF808	Q8N4W9	903 aa	Predicted RBP	13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	AMER2	Q8N7J2	671 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SUN3	Q8TAQ9	357 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MMAB	Q96EY8	250 aa	Predicted RBP	13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CHST11	Q9NPF2	352 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	RAB6B	Q9NRW1	208 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	C14orf105	Q9NVL8	296 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SPATA7	Q9P0W8	599 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ABI3	Q9P2A4	366 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	TSR3	Q9UJK0	312 aa	Known RBP	13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	RUVBL1	Q9Y265	456 aa	Known RBP	13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	HEATR5B	Q9P2D3	2071 aa		13.54	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PDZD2	O15018	2839 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	OTOG	Q6ZRI0	2925 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	VPS26A	O75436	327 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	FTCD	O95954	541 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ANXA5	P08758	320 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MYBL2	P10244	700 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ICAM2	P13598	275 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	COX6B1	P14854	86 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ETS1	P14921	441 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PTGER4	P35408	488 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SLC26A3	P40879	764 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	EIF3B	P55884	814 aa	Known RBP	13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	RIPPLY3	P57055	190 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	RBPJ	Q06330	500 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	TSTA3	Q13630	321 aa	Predicted RBP	13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PCOLCE	Q15113	449 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ZNF630	Q2M218	657 aa	Predicted RBP	13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	HKDC1	Q2TB90	917 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PCID2	Q5JVF3	399 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ABHD17B	Q5VST6	288 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	LRRC8B	Q6P9F7	803 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SUSD1	Q6UWL2	747 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PRUNE1	Q86TP1	453 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	LRRC6	Q86X45	466 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SYCE1	Q8N0S2	351 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CSNK1A1L	Q8N752	337 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	AMER3	Q8N944	861 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ACRBP	Q8NEB7	543 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MVB12A	Q96EY5	273 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	LURAP1	Q96LR2	239 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PANX2	Q96RD6	677 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PLCD4	Q9BRC7	762 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	TGIF2	Q9GZN2	237 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	RNF32	Q9H0A6	362 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ZNF700	Q9H0M5	742 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MRPS30	Q9NP92	439 aa	Known RBP	13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	STMN3	Q9NZ72	180 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ZNF148	Q9UQR1	794 aa		13.53	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	LOC102723996	A0A087X1L8	192 aa		13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	OR5H15	A6NDH6	313 aa		13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	LIAS	O43766	372 aa		13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	PRAMEF2	O60811	474 aa		13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	APRT	P07741	180 aa		13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	RPS3	P23396	243 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	RPA3	P35244	121 aa	Predicted RBP	13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	SESN2	P58004	480 aa	Predicted RBP	13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	AP2B1	P63010	937 aa		13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	ZNF33B	Q06732	778 aa		13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	OASL	Q15646	514 aa	Known RBP	13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	SYT16	Q17RD7	645 aa		13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	ANKRD20A4	Q4UJ75	823 aa		13.52	□□□□□ -0.25
HLA-DQB2-229	ENST00000411527	RAD9B	Q6WBX8	426 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms