RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 VAMP7P51809 220 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 XGP55808 180 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 GSCP56915 257 aaPredicted RBP3.46□□□□□ -1.85
PMS1-203ENST00000409593 SLC8A3P57103 927 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 CSNK2BP67870 215 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 CALD1Q05682 793 aaKnown RBP3.46□□□□□ -1.85
PMS1-203ENST00000409593 TRAP1Q12931 704 aaKnown RBP3.46□□□□□ -1.85
PMS1-203ENST00000409593 EXT1Q16394 746 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 TMEM266Q2M3C6 531 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 ERMARDQ5T6L9 678 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 CES4AQ5XG92 561 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 OR4A47Q6IF82 309 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 PRPF39Q86UA1 669 aaKnown RBP3.46□□□□□ -1.85
PMS1-203ENST00000409593 RYBPQ8N488 228 aaPredicted RBP3.46□□□□□ -1.85
PMS1-203ENST00000409593 OR7A2PQ8NGA2 310 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 KCNE4Q8WWG9 221 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 GPATCH1Q9BRR8 931 aaKnown RBP3.46□□□□□ -1.85
PMS1-203ENST00000409593 SLC2A11Q9BYW1 496 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 O00370 1275 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 PTGESO14684 152 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 TEX28O15482 410 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 IDH3BO43837 385 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 DIAPH2O60879 1101 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 SAGP10523 405 aaPredicted RBP3.46□□□□□ -1.86
PMS1-203ENST00000409593 EEF1B2P24534 225 aaKnown RBP3.46□□□□□ -1.86
PMS1-203ENST00000409593 PRPF4BQ13523 1007 aaKnown RBP3.46□□□□□ -1.86
PMS1-203ENST00000409593 RAPSNQ13702 412 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 MTF1Q14872 753 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 KIF6Q6ZMV9 814 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 PLPPR4Q7Z2D5 763 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 P2RY8Q86VZ1 359 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 NOA1Q8NC60 698 aaKnown RBP3.46□□□□□ -1.86
PMS1-203ENST00000409593 NUP37Q8NFH4 326 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 ARSGQ96EG1 525 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 MUS81Q96NY9 551 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 FEVQ99581 238 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 SLF1Q9BQI6 1058 aa3.46□□□□□ -1.86
PMS1-203ENST00000409593 MYH14Q7Z406 1995 aaKnown RBP3.45□□□□□ -1.86
PMS1-203ENST00000409593 TDRD15B5MCY1 1934 aaKnown RBP3.45□□□□□ -1.86
PMS1-203ENST00000409593 A0A087WUV0 522 aaPredicted RBP3.45□□□□□ -1.86
PMS1-203ENST00000409593 SYNDIG1LA6NDD5 238 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 CLDN4O14493 209 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 SOCS3O14543 225 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 RPS6KA5O75582 802 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 SLCO2B1O94956 709 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 CELF2O95319 508 aaKnown RBP3.45□□□□□ -1.86
PMS1-203ENST00000409593 ATP1B1P05026 303 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 GATA1P15976 413 aaPredicted RBP3.45□□□□□ -1.86
PMS1-203ENST00000409593 HLA-FP30511 346 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 POLR2LP62875 67 aaKnown RBP3.45□□□□□ -1.86
PMS1-203ENST00000409593 CALCOCO2Q13137 446 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 CDH18Q13634 790 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 TMEM132DQ14C87 1099 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 NPTX1Q15818 432 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 MOGAT2Q3SYC2 334 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 ARMC4Q5T2S8 1044 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 MFSD4BQ5TF39 518 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 LEKR1Q6ZMV7 388 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 CATSPERDQ86XM0 798 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 SPEM1Q8N4L4 309 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 Q8NBF4 154 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 AQP11Q8NBQ7 271 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 ATP8B4Q8TF62 1192 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 PROX1Q92786 737 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 MED20Q9H944 212 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 RPS10P5Q9NQ39 176 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 TBC1D7Q9P0N9 293 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 MUTYHQ9UIF7 546 aa3.45□□□□□ -1.86
PMS1-203ENST00000409593 A0A1W2PPK0 400 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 H0YAE9 185 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 AP5Z1O43299 807 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 SNX3O60493 162 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 CSN3P07498 182 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 EPCAMP16422 314 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 CPT2P23786 658 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 SHC1P29353 583 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 ACSM1Q08AH1 577 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 ELAVL2Q12926 359 aaKnown RBP3.44□□□□□ -1.86
PMS1-203ENST00000409593 NFATC2Q13469 925 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 TRIM29Q14134 588 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 MTHFSDQ2M296 383 aaKnown RBP3.44□□□□□ -1.86
PMS1-203ENST00000409593 GPR33Q49SQ1 333 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 GLIPR1L2Q4G1C9 344 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 NAA16Q6N069 864 aaPredicted RBP3.44□□□□□ -1.86
PMS1-203ENST00000409593 NOTUMQ6P988 496 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 GPRIN3Q6ZVF9 776 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 RASGEF1AQ8N9B8 481 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 KCTD6Q8NC69 237 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 METTL21AQ8WXB1 218 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 ROBO4Q8WZ75 1007 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 GTF3AQ92664 365 aaKnown RBP3.44□□□□□ -1.86
PMS1-203ENST00000409593 PRICKLE1Q96MT3 831 aaPredicted RBP3.44□□□□□ -1.86
PMS1-203ENST00000409593 MAP3K3Q99759 626 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 TXNDC16Q9P2K2 825 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 KLK13Q9UKR3 277 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 ZHX2Q9Y6X8 837 aa3.44□□□□□ -1.86
PMS1-203ENST00000409593 TRBV4-1A0A0J9YWV2 114 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 TRBV5-5A0A0J9YX44 114 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 PI4K2BG5E9Z4 385 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms