RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 ZBTB45Q96K62 511 aaPredicted RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 HEXIM2Q96MH2 286 aaKnown RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 SAMD11Q96NU1 681 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 COL21A1Q96P44 957 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 CASD1Q96PB1 797 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 LGMNQ99538 433 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 SPATA9Q9BWV2 254 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 CWH43Q9H720 699 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 ACTR8Q9H981 624 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 ACSS2Q9NR19 701 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 NDFIP2Q9NV92 336 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 MED9Q9NWA0 146 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 PSORS1C1Q9UIG5 152 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 MAPRE3Q9UPY8 281 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 PKP3Q9Y446 797 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 STON1Q9Y6Q2 735 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 A0A0U1RQF3 1178 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 IQCMA0A1B0GVH7 501 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 INO80B-WBP1J3KQ70 363 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 GNGT2O14610 69 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 NOBOXO60393 691 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 MAP3K6O95382 1288 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 HGFP14210 728 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 PAMP19021 973 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 TNNI3P19429 210 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 NFKB1P19838 968 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 MAGP20916 626 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 KCNA5P22460 613 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 CBLP22681 906 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 F8A1P23610 371 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 PTPN3P26045 913 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 PTBP1P26599 531 aaKnown RBP eCLIP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 NMBRP28336 390 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 HOXA11P31270 313 aaPredicted RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 FMO3P31513 532 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 IRS1P35568 1242 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 ALDH9A1P49189 494 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 GBX2P52951 348 aaPredicted RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 AIF1P55008 147 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 PER3P56645 1201 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 YBX1P67809 324 aaKnown RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 PRKG2Q13237 762 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 CAPSQ13938 189 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 GRB7Q14451 532 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 NFE2L1Q14494 772 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 MXD4Q14582 209 aaPredicted RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 IRF3Q14653 427 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 QPRTQ15274 297 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 STK11Q15831 433 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 CDO1Q16878 200 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 HKDC1Q2TB90 917 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 TCEAL5Q5H9L2 206 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 BSPRYQ5W0U4 402 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 KIAA0930Q6ICG6 404 aaPredicted RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 JADE1Q6IE81 842 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 CCDC149Q6ZUS6 474 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 PLEKHM3Q6ZWE6 761 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 GPR149Q86SP6 731 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 ASPGQ86U10 573 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 OR8H2Q8N162 312 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 PMEPA1Q969W9 287 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 TESCQ96BS2 214 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 ZSWIM3Q96MP5 696 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 ZNF583Q96ND8 569 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 TRNT1Q96Q11 434 aaKnown RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 TMEM209Q96SK2 561 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 ACOX2Q99424 681 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 MIR1-1HGQ9H1L0 117 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 SLC6A15Q9H2J7 730 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 SMURF1Q9HCE7 757 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 ITM2CQ9NQX7 267 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 ZC4H2Q9NQZ6 224 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 DCAF13Q9NV06 445 aaKnown RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 POLG2Q9UHN1 485 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 FZD10Q9ULW2 581 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 KLHL20Q9Y2M5 609 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 MFHAS1Q9Y4C4 1052 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 GMPPBQ9Y5P6 360 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 A0A0U1RQS6 177 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 MEN1O00255 615 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 PIP5K1BO14986 540 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 SGTAO43765 313 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 MFSD11O43934 449 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 B4GALT3O60512 393 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 SNAPC5O75971 98 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 MT-ND1P03886 318 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 CDK1P06493 297 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 CPB1P15086 417 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 ABCG1P45844 678 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 SOX9P48436 509 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 RGS6P49758 472 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 AFF1P51825 1210 aaKnown RBP10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 ARHGDIAP52565 204 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 GPR19Q15760 415 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 AANATQ16613 207 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 GLYR1Q49A26 553 aaPredicted RBP10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 XKR7Q5GH72 579 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 CERCAMQ5T4B2 595 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 KIAA1614Q5VZ46 1190 aa10.33□□□□□ -0.76
NIF3L1-204ENST00000409357 CPZQ66K79 652 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms