RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 KLC1Q07866 573 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 POU6F1Q14863 301 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 TCEAL1Q15170 157 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 SPA17Q15506 151 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 PARP6Q2NL67 630 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 FASTKD1Q53R41 847 aaKnown RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 KRTCAP3Q53RY4 240 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 ZNF468Q5VIY5 522 aaPredicted RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 AFTPHQ6ULP2 937 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 PACS1Q6VY07 963 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 LUZP1Q86V48 1076 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 CNGA4Q8IV77 575 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 CEP97Q8IW35 865 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 PRSS58Q8IYP2 241 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 METTL27Q8N6F8 245 aaPredicted RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 DNAAF3Q8N9W5 541 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 OR2L8Q8NGY9 312 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 MCOLN3Q8TDD5 553 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 BRIX1Q8TDN6 353 aaKnown RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 RERGQ96A58 199 aaPredicted RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 MTFMTQ96DP5 389 aaKnown RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 MVB12AQ96EY5 273 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 CCDC120Q96HB5 630 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 CABS1Q96KC9 395 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 PANX3Q96QZ0 392 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 DNAJC7Q99615 494 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 HEMGNQ9BXL5 484 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 RNF32Q9H0A6 362 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 NHEJ1Q9H9Q4 299 aaPredicted RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 NEUROD4Q9HD90 331 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 SLC22A11Q9NSA0 550 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 SPTLC3Q9NUV7 552 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 COQ3Q9NZJ6 369 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 IMPACTQ9P2X3 320 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 TRPC4Q9UBN4 977 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 CTSFQ9UBX1 484 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 ZC3H7BQ9UGR2 993 aaKnown RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 PLAGL1Q9UM63 463 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 ZNF232Q9UNY5 417 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 EFR3BQ9Y2G0 817 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 HYOU1Q9Y4L1 999 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 ALG6Q9Y672 507 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 MAU2Q9Y6X3 613 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 CROCCQ5TZA2 2017 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 ANKRD17O75179 2603 aaKnown RBP7.38□□□□□ -1.23
LSM5-202ENST00000409292 PKDREJQ9NTG1 2253 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 SLC5A10A0PJK1 596 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 SERTM1A2A2V5 107 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 FITM1A5D6W6 292 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 VSTM2BA6NLU5 285 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 ZNF839A8K0R7 811 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 E7EVH7 732 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 CCL22O00626 93 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 HCRTR1O43613 425 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 SLC19A2O60779 497 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 SUN1O94901 812 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 CCNDBP1O95273 360 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 CLDN14O95500 239 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 PRR35P0CG20 571 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 PKMP14618 531 aaKnown RBP7.38□□□□□ -1.23
LSM5-202ENST00000409292 GRIA3P42263 894 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 MAGEA1P43355 309 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 ZNF33BQ06732 778 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 NDUFA9Q16795 377 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 MEI1Q5TIA1 1274 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 PTRHD1Q6GMV3 140 aaKnown RBP7.38□□□□□ -1.23
LSM5-202ENST00000409292 LINC00114Q6XXX2 140 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 CDH24Q86UP0 819 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 TAX1BP1Q86VP1 789 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 SLC22A15Q8IZD6 547 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 SIRT6Q8N6T7 355 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 OR6P1Q8NGX9 317 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 ACTL9Q8TC94 416 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 ZNF354BQ96LW1 612 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 TUBB6Q9BUF5 446 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 OSBPL8Q9BZF1 889 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 MKKSQ9NPJ1 570 aaPredicted RBP7.38□□□□□ -1.23
LSM5-202ENST00000409292 ABHD10Q9NUJ1 306 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 PLA2G3Q9NZ20 509 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 STMN3Q9NZ72 180 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 KLHL20Q9Y2M5 609 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 PRRC2CQ9Y520 2896 aaKnown RBP7.38□□□□□ -1.23
LSM5-202ENST00000409292 PCM1Q15154 2024 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 CCDC88CQ9P219 2028 aa7.38□□□□□ -1.23
LSM5-202ENST00000409292 A0A0J9YVX5 310 aa7.37□□□□□ -1.23
LSM5-202ENST00000409292 POM121CA8CG34 1229 aa7.37□□□□□ -1.23
LSM5-202ENST00000409292 ERI2A8K979 691 aaKnown RBP7.37□□□□□ -1.23
LSM5-202ENST00000409292 A8MUI8 341 aa7.37□□□□□ -1.23
LSM5-202ENST00000409292 IDSB3KWA1 339 aa7.37□□□□□ -1.23
LSM5-202ENST00000409292 FAM227AF5H4B4 570 aa7.37□□□□□ -1.23
LSM5-202ENST00000409292 PRRG2O14669 202 aa7.37□□□□□ -1.23
LSM5-202ENST00000409292 KRT38O76015 456 aa7.37□□□□□ -1.23
LSM5-202ENST00000409292 CD1EP15812 388 aa7.37□□□□□ -1.23
LSM5-202ENST00000409292 ABOP16442 354 aa7.37□□□□□ -1.23
LSM5-202ENST00000409292 HOXB4P17483 251 aaPredicted RBP7.37□□□□□ -1.23
LSM5-202ENST00000409292 TPH1P17752 444 aa7.37□□□□□ -1.23
LSM5-202ENST00000409292 MCM3P25205 808 aa7.37□□□□□ -1.23
LSM5-202ENST00000409292 EEF1DP29692 281 aaKnown RBP7.37□□□□□ -1.23
LSM5-202ENST00000409292 AVPR1BP47901 424 aa7.37□□□□□ -1.23
LSM5-202ENST00000409292 TTPAP49638 278 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms