RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 RASSF1Q9NS23 344 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 SPATA7Q9P0W8 599 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 EPHA6Q9UF33 1036 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 SLCO3A1Q9UIG8 710 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 A0A0U1RQJ8 604 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 EFCAB7A8K855 629 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 CDC123O75794 336 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-203ENST00000409101 LINGO3P0C6S8 592 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 ATP6V1B1P15313 513 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 DRD4P21917 467 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 ITGB7P26010 798 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 HOXC13P31276 330 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 GNALP38405 381 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 PLCXD2Q0VAA5 305 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 RIN1Q13671 783 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 OASLQ15646 514 aaKnown RBP4.88□□□□□ -1.63
SCN3A-203ENST00000409101 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.88□□□□□ -1.63
SCN3A-203ENST00000409101 KIAA0319Q5VV43 1072 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 ARMC3Q5W041 872 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 NOXRED1Q6NXP6 359 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 SPESP1Q6UW49 350 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 SUSD1Q6UWL2 747 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 TMIGD1Q6UXZ0 262 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 SETD6Q8TBK2 473 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 PIH1D2Q8WWB5 315 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 RLN3Q8WXF3 142 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 RORBQ92753 470 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 SCAMP4Q969E2 229 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 ESAMQ96AP7 390 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 TRIM43Q96BQ3 446 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-203ENST00000409101 EFHD2Q96C19 240 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-203ENST00000409101 P2RX2Q9UBL9 471 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 PISDQ9UG56 409 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 SLC2A6Q9UGQ3 507 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 KCTD3Q9Y597 815 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 WASF2Q9Y6W5 498 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 A0A1B0GTW7 788 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 TCRBV7S2A1N4TA0A589 114 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 TNFRSF10BO14763 440 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 RBMXL2O75526 392 aaKnown RBP4.88□□□□□ -1.63
SCN3A-203ENST00000409101 OR5F1O95221 314 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 METTL18O95568 372 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 C8orf89P0DMQ9 161 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 MYCLP1P12525 358 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-203ENST00000409101 PROZP22891 400 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 ACVR2AP27037 513 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 GJA4P35212 333 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 PBX1P40424 430 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 HERVK_113P63132 956 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 SLC25A11Q02978 314 aaKnown RBP4.88□□□□□ -1.63
SCN3A-203ENST00000409101 DPY19L1Q2PZI1 675 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 SLC9A4Q6AI14 798 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 TNFAIP8L2Q6P589 184 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-203ENST00000409101 TMPRSS11AQ6ZMR5 421 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 BNIPLQ7Z465 357 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF100Q8IYN0 542 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 UMODL1-AS1Q8N2C9 162 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 TTC9BQ8N6N2 239 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 TSGA13Q96PP4 275 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 ERVK-6Q9BXR3 956 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 GAREM1Q9H706 876 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 TMLHEQ9NVH6 421 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 CNTN6Q9UQ52 1028 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 ERGIC3Q9Y282 383 aa4.88□□□□□ -1.63
SCN3A-203ENST00000409101 PKD1L3Q7Z443 1732 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 HYKKA2RU49 373 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 NUDT17P0C025 328 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 GDI2P50395 445 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 MTTPP55157 894 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SCARB2Q14108 478 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CDKN3Q16667 212 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 MARCH8Q5T0T0 291 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 DCAF12Q5T6F0 453 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 FRG2Q64ET8 278 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF57Q68EA5 555 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 DNM1P34Q6PK57 102 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 GOLGA7Q7Z5G4 137 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 OR8H2Q8N162 312 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ANKFN1Q8N957 763 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 OR4C6Q8NH72 309 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 RCN3Q96D15 328 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 FRG2BQ96QU4 278 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CCNL2Q96S94 520 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 IFT27Q9BW83 186 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SLC46A2Q9BY10 475 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SPRTNQ9H040 489 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF334Q9HCZ1 680 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 FARSBQ9NSD9 589 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SLC17A7Q9P2U7 560 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 UPB1Q9UBR1 384 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 AJAP1Q9UKB5 411 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CDC14CA4D256 554 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 K7ERQ8 282 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TNFRSF11BO00300 401 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 KPNA4O00629 521 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SERPINA3P01011 423 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 FAM58BPP0C7Q3 252 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SRCP12931 536 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 EFNA1P20827 205 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 RPS13P62277 151 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms