RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 APOL4Q9BPW4 351 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 ZNF556Q9HAH1 456 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 SGK2Q9HBY8 427 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 EQTNQ9NQ60 294 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 STARD7Q9NQZ5 370 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 RLIMQ9NVW2 624 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 ADPRHL2Q9NX46 363 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 HECAQ9UBI9 543 aaPredicted RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 ERGIC3Q9Y282 383 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 GMEB1Q9Y692 573 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 TCRBV5S2A0A599 114 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 RBM47A0AV96 593 aaKnown RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 TNFRSF11BO00300 401 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 AP3D1O14617 1153 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 CLDN9O95484 217 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 APOA1P02647 267 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 RPS17P08708 135 aaKnown RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 DGKAP23743 735 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 HOXD9P28356 352 aaPredicted RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 HOXD12P35452 270 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 HNF1BP35680 557 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 KRT20P35900 424 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 CBX2Q14781 532 aaPredicted RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 DPY19L1Q2PZI1 675 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 ATP13A5Q4VNC0 1218 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 RPS26P11Q5JNZ5 115 aaPredicted RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 AKAP14Q86UN6 197 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 IQCF1Q8N6M8 205 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 OR13F1Q8NGS4 319 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 ASB2Q96Q27 587 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 ALPK1Q96QP1 1244 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 SYT17Q9BSW7 474 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 ACPTQ9BZG2 426 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 OSGEPL1Q9H4B0 414 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 ACTL8Q9H568 366 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 BRD9Q9H8M2 597 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 BEX1Q9HBH7 125 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 TRPV5Q9NQA5 729 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 ABCB8Q9NUT2 735 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 NLE1Q9NVX2 485 aaPredicted RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 FZD4Q9ULV1 537 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 KLHL20Q9Y2M5 609 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 MED16Q9Y2X0 877 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 GPC6Q9Y625 555 aaPredicted RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 DOCK1Q14185 1865 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 SZT2Q5T011 3432 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 TRBV23OR9-2A0A075B6M9 112 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 MROH6A6NGR9 719 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 C5orf58C9J3I9 102 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 NEDD8-MDP1E9PL57 170 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 TNFRSF10BO14763 440 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 ANXA4P09525 319 aaPredicted RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 SOX3P41225 446 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 RACK1P63244 317 aaKnown RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 HSPB3Q12988 150 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 KCNJ8Q15842 424 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 CLEC12AQ5QGZ9 265 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 DESI1Q6ICB0 168 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 OR2T5Q6IEZ7 315 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 B3GLCTQ6Y288 498 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 EFL1Q7Z2Z2 1120 aaKnown RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 FBXO22Q8NEZ5 403 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 OR9Q1Q8NGQ5 310 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 OR2T29Q8NH02 315 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 MTERF3Q96E29 417 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 FEVQ99581 238 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 TBX5Q99593 518 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 MMP28Q9H239 520 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 CFAP97Q9P2B7 532 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 ITM2BQ9Y287 266 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 SEPT4O43236 478 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 LATO43561 262 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 TLL1O43897 1013 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 OR10H3O60404 316 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 VPS4BO75351 444 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 HTR1AP08908 422 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 GABRR2P28476 465 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 WASP42768 502 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 CSNK1DP48730 415 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 DAPP51397 102 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 MCCD1P59942 119 aaPredicted RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 PHC1P78364 1004 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 MLLT1Q03111 559 aaPredicted RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 DSC3Q14574 896 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 SETMARQ53H47 684 aaPredicted RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 ZC3H12BQ5HYM0 836 aaKnown RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 SPANXN2Q5MJ10 180 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 ZNF852Q6ZMS4 543 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 LIMS2Q7Z4I7 341 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 RTN4RL1Q86UN2 441 aaPredicted RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 OR5K1Q8NHB7 308 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 NFKBIDQ8NI38 313 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 ING5Q8WYH8 240 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 KLK6Q92876 244 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 CIDECQ96AQ7 238 aaPredicted RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 DNAJA3Q96EY1 480 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 PYURFQ96I23 114 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 ZNF641Q96N77 438 aaPredicted RBP8.08□□□□□ -1.12
SNX13-201ENST00000409076 NEURL2Q9BR09 285 aa8.08□□□□□ -1.12
SNX13-201ENST00000409076 CCM2Q9BSQ5 444 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms