RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 DNAJC11Q9NVH1 559 aa16.06■□□□□ 0.16
COL23A1-202ENST00000407622 BAG5Q9UL15 447 aa16.06■□□□□ 0.16
COL23A1-202ENST00000407622 CCL26Q9Y258 94 aa16.06■□□□□ 0.16
COL23A1-202ENST00000407622 NAALAD2Q9Y3Q0 740 aa16.06■□□□□ 0.16
COL23A1-202ENST00000407622 A0A1W2PQ67 120 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 MYO1GB0I1T2 1018 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 GFYI3L273 518 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 FPGTO14772 594 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 SCN2BO60939 215 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 ATP1B2P14415 290 aaPredicted RBP16.05■□□□□ 0.16
COL23A1-202ENST00000407622 ENGP17813 658 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 IL1RNP18510 177 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 EPHA2P29317 976 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 CLK3P49761 638 aaKnown RBP16.05■□□□□ 0.16
COL23A1-202ENST00000407622 VLDLRP98155 873 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 FKBP9P1Q75LS8 142 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 PIWIL3Q7Z3Z3 882 aaKnown RBP16.05■□□□□ 0.16
COL23A1-202ENST00000407622 TMC8Q8IU68 726 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 ZZZ3Q8IYH5 903 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 NELL1Q92832 810 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 MTERF1Q99551 399 aaKnown RBP16.05■□□□□ 0.16
COL23A1-202ENST00000407622 KLHL42Q9P2K6 505 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 VPS4AQ9UN37 437 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 BTBD3Q9Y2F9 522 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 TRIM43BA6NCK2 446 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 LEFTY2O00292 366 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 CLIC1O00299 241 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 SGTAO43765 313 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 CCNDBP1O95273 360 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 KCNK5O95279 499 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 CA8P35219 290 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 PTPN5P54829 565 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 MTAPQ13126 283 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 DDX39BQ13838 428 aaKnown RBP16.05■□□□□ 0.16
COL23A1-202ENST00000407622 MPP7Q5T2T1 576 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 CRTC3Q6UUV7 619 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 B3GNT8Q7Z7M8 397 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 PTOV1Q86YD1 416 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 PIK3C3Q8NEB9 887 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 FBLIM1Q8WUP2 373 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 MRPS31Q92665 395 aaKnown RBP16.05■□□□□ 0.16
COL23A1-202ENST00000407622 TRIM43Q96BQ3 446 aaPredicted RBP16.05■□□□□ 0.16
COL23A1-202ENST00000407622 MAGED4Q96JG8 741 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 PANX1Q96RD7 426 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 BLOC1S6Q9UL45 172 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 HS3ST2Q9Y278 367 aa16.05■□□□□ 0.16
COL23A1-202ENST00000407622 ITGAMP11215 1152 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 RYKP34925 604 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 RAD23AP54725 363 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 EMX1Q04741 257 aaPredicted RBP16.04■□□□□ 0.16
COL23A1-202ENST00000407622 DUOXA1Q1HG43 343 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 OR2T5Q6IEZ7 315 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 ZNF621Q6ZSS3 439 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 SYT12Q8IV01 421 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 TCAIMQ8N3R3 496 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 OR2T29Q8NH02 315 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 FAR1Q8WVX9 515 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 TRIT1Q9H3H1 467 aaKnown RBP16.04■□□□□ 0.16
COL23A1-202ENST00000407622 RAD21L1Q9H4I0 556 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 IL1RAPQ9NPH3 570 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 ERVK-18Q9QC07 812 aa16.04■□□□□ 0.16
COL23A1-202ENST00000407622 OR2AG2A6NM03 316 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 E7EQ34 232 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 CLPXO76031 633 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 CPSF4O95639 269 aaKnown RBP16.03■□□□□ 0.16
COL23A1-202ENST00000407622 ANGPTL1O95841 491 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 TIMP1P01033 207 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 JUPP14923 745 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 ITIH1P19827 911 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 MAPK1P28482 360 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 CD6P30203 668 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 MAP2K4P45985 399 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 HNMTP50135 292 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 SLC7A9P82251 487 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 CTF1Q16619 201 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 VMACQ2NL98 169 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 CCSMST1Q4G0I0 132 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.03■□□□□ 0.16
COL23A1-202ENST00000407622 HSD11B1LQ7Z5J1 315 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 SERPINA11Q86U17 422 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 LILRA3Q8N6C8 439 aaPredicted RBP16.03■□□□□ 0.16
COL23A1-202ENST00000407622 ELMO1Q92556 727 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 ENPP5Q9UJA9 477 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 SAMD4AQ9UPU9 718 aaKnown RBP16.03■□□□□ 0.16
COL23A1-202ENST00000407622 TMED5Q9Y3A6 229 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 ORC6Q9Y5N6 252 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 SNX5Q9Y5X3 404 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 EIF3FO00303 357 aaPredicted RBP16.03■□□□□ 0.16
COL23A1-202ENST00000407622 ETHE1O95571 254 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 SEMG1P04279 462 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 HNRNPCP07910 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL23A1-202ENST00000407622 NUDT7P0C024 238 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 MPC1LP0DKB6 136 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 LAMP1P11279 417 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 SMN1Q16637 294 aaKnown RBP16.03■□□□□ 0.16
COL23A1-202ENST00000407622 ZC3H12BQ5HYM0 836 aaKnown RBP16.03■□□□□ 0.16
COL23A1-202ENST00000407622 TTC23LQ6PF05 361 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 C16orf87Q6PH81 154 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 GPR155Q7Z3F1 870 aa16.03■□□□□ 0.16
COL23A1-202ENST00000407622 BTLAQ7Z6A9 289 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms