RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 OXTRP30559 389 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 RPS21P63220 83 aaKnown RBP23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 HIST2H2ACQ16777 129 aaPredicted RBP23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 PAGE2BQ5JRK9 111 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 CATSPEREQ5SY80 951 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 THEMIS2Q5TEJ8 643 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 HIST2H2AA3Q6FI13 130 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 MSANTD1Q6ZTZ1 278 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 GPR180Q86V85 440 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 MSRB3Q8IXL7 192 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 LRRC56Q8IYG6 542 aaPredicted RBP23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 OXR1Q8N573 874 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 ANKFN1Q8N957 763 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 LMNTD1Q8N9Z9 388 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 TNIP2Q8NFZ5 429 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 OR5AR1Q8NGP9 310 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 SETD7Q8WTS6 366 aaKnown RBP23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 TFGQ92734 400 aaPredicted RBP23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 BIRC7Q96CA5 298 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 WDR34Q96EX3 536 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 ZNF583Q96ND8 569 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 PHPT1Q9NRX4 125 aaPredicted RBP23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 SLC25A37Q9NYZ2 338 aa23.83■■□□□ 1.41
DNMT3A-206ENST00000406659 GSTA4O15217 222 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 PI15O43692 258 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 DNTTP04053 509 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 RPN2P04844 631 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 LYNP07948 512 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 FASP25445 335 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 HTR4Q13639 388 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 MAP7Q14244 749 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 SLBPQ14493 270 aaKnown RBP eCLIP23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 DCUN1D3Q8IWE4 304 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 TMEM132CQ8N3T6 1108 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 OR2T12Q8NG77 320 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 OR14C36Q8NHC7 312 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 TM7SF3Q9NS93 570 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 DLGAP2Q9P1A6 1054 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 SH2B3Q9UQQ2 575 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 TDRKHQ9Y2W6 561 aaKnown RBP23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 PCDHB14Q9Y5E9 798 aa23.83■■□□□ 1.4
DNMT3A-206ENST00000406659 TICRRQ7Z2Z1 1910 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 VGLL3A8MV65 326 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 GPR89AB7ZAQ6 455 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 DENRO43583 198 aaKnown RBP23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 GPR89BP0CG08 455 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 FCGR1AP12314 374 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 ZNF26P17031 533 aaPredicted RBP23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 TRIM23P36406 574 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 SRSF11Q05519 484 aaKnown RBP23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 FGL2Q14314 439 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 DPY19L1Q2PZI1 675 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 LRIF1Q5T3J3 769 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 METRNLQ641Q3 311 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 NXPE4Q6UWF7 544 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 TP53I13Q8NBR0 393 aaPredicted RBP23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 OR10A6Q8NH74 314 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 SLC5A11Q8WWX8 675 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 MKRN2Q9H000 416 aaKnown RBP23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 EHD1Q9H4M9 534 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 RPF2Q9H7B2 306 aaKnown RBP23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 SERHLQ9NQF3 203 aa23.82■■□□□ 1.4
DNMT3A-206ENST00000406659 H0YJX3 145 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 SH3BGRLO75368 114 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 ANXA6P08133 673 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 GGT1P19440 569 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 KIR3DL1P43629 444 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 RPS13P62277 151 aaKnown RBP23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 LAPTM5Q13571 262 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 PDK3Q15120 406 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 GTDC1Q4AE62 458 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 TMEM196Q5HYL7 178 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 C10orf62Q5T681 223 aaPredicted RBP23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 OR4F3Q6IEY1 312 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 ADNP2Q6IQ32 1131 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 ANKRD46Q86W74 232 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 DTWD1Q8N5C7 304 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 C1orf52Q8N6N3 182 aaKnown RBP23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 CDC26Q8NHZ8 85 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 GBP5Q96PP8 586 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 CIB1Q99828 191 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 GABRG3Q99928 467 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 INPP5KQ9BT40 448 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 C1QTNF2Q9BXJ5 285 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 FBRSQ9HAH7 460 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 PLAGL1Q9UM63 463 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 INVSQ9Y283 1065 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 AP4B1Q9Y6B7 739 aa23.81■■□□□ 1.4
DNMT3A-206ENST00000406659 TRBV5-3A0A0A0MS03 114 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 KLHL33A6NCF5 533 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 TPST1O60507 370 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 SMNDC1O75940 238 aaKnown RBP eCLIP23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 ETHE1O95571 254 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 SPIN4Q56A73 249 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 KIAA1161Q6NSJ0 714 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 TBC1D21Q8IYX1 336 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 CHTF18Q8WVB6 975 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 STARD8Q92502 1023 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 NELL1Q92832 810 aa23.8■■□□□ 1.4
DNMT3A-206ENST00000406659 CCDC115Q96NT0 180 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms