RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, human

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-205	ENST00000405675	PRDM6	Q9NQX0	595 aa		28	■■■□□ 2.07
CSNK1E-205	ENST00000405675	AQP12B	A6NM10	295 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	MAGEB17	A8MXT2	336 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	B3GALT4	O96024	378 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	PCNA	P12004	261 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	MAPK1	P28482	360 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	RPS21	P63220	83 aa	Known RBP	27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	ZNF33B	Q06732	778 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	TICAM1	Q8IUC6	712 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	AQP12A	Q8IXF9	295 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	GFM2	Q969S9	779 aa	Known RBP	27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	MSANTD3	Q96H12	275 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	TRIM15	Q9C019	465 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	ITM2C	Q9NQX7	267 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	SLC25A37	Q9NYZ2	338 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	SNX13	Q9Y5W8	968 aa		27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	CFAP20	Q9Y6A4	193 aa	Known RBP	27.99	■■■□□ 2.07
CSNK1E-205	ENST00000405675	CAPNS1	P04632	268 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	TMEM259	Q4ZIN3	620 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	METRNL	Q641Q3	311 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	RIMKLA	Q8IXN7	391 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	HUS1B	Q8NHY5	278 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	SEMA6A	Q9H2E6	1030 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	SLC6A13	Q9NSD5	602 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	RNGTT	O60942	597 aa	Known RBP	27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	GTDC1	Q4AE62	458 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	C2orf73	Q8N5S3	287 aa	Predicted RBP	27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	TFG	Q92734	400 aa	Predicted RBP	27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	SIPA1	Q96FS4	1042 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	IKZF5	Q9H5V7	419 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	DYRK1B	Q9Y463	629 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	PCDHGA11	Q9Y5H2	935 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	NUMA1	Q14980	2115 aa		27.98	■■■□□ 2.07
CSNK1E-205	ENST00000405675	ACPP	P15309	386 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	HRH2	P25021	359 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	TEAD1	P28347	426 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	ADPRH	P54922	357 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	SGCG	Q13326	291 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	MLF2	Q15773	248 aa	Predicted RBP	27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	HMBOX1	Q6NT76	420 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	MRGPRX1	Q96LB2	322 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	UHRF1	Q96T88	793 aa	Predicted RBP	27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	CA14	Q9ULX7	337 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	CLNS1A	P54105	237 aa	Known RBP	27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	FXN	Q16595	210 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	EOGT	Q5NDL2	527 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	ADCY4	Q8NFM4	1077 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	OR8J3	Q8NGG0	315 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	WDR34	Q96EX3	536 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	SLC17A9	Q9BYT1	436 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	SERHL	Q9NQF3	203 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	CCM2L	Q9NUG4	571 aa	Predicted RBP	27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	GEMIN8	Q9NWZ8	242 aa	Known RBP	27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	DUSP12	Q9UNI6	340 aa		27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	TDRKH	Q9Y2W6	561 aa	Known RBP	27.97	■■■□□ 2.07
CSNK1E-205	ENST00000405675	KMO	O15229	486 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	TIPRL	O75663	272 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	HTR1E	P28566	365 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	OXTR	P30559	389 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	MAT2A	P31153	395 aa	Known RBP	27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	S100A3	P33764	101 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	SLBP	Q14493	270 aa	Known RBP eCLIP	27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	PGS1	Q32NB8	556 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	MED27	Q6P2C8	311 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	C11orf24	Q96F05	449 aa	Predicted RBP	27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	HHIP	Q96QV1	700 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	SPNS1	Q9H2V7	528 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	MUC13	Q9H3R2	512 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	BRF2	Q9HAW0	419 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	FZD3	Q9NPG1	666 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	CCDC177	Q9NQR7	707 aa	Predicted RBP	27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	TRIO	O75962	3097 aa		27.96	■■■□□ 2.07
CSNK1E-205	ENST00000405675	TCRBV5S2	A0A599	114 aa		27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	DHRS12	A0PJE2	317 aa		27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	AKAP10	O43572	662 aa		27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	RPL10	P27635	214 aa	Known RBP	27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	ATG9B	Q674R7	924 aa		27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675		Q6ZS52	159 aa		27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	ADGRG5	Q8IZF4	528 aa		27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	SLC5A11	Q8WWX8	675 aa		27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	RAD51AP1	Q96B01	352 aa		27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	TESC	Q96BS2	214 aa		27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	INPP5K	Q9BT40	448 aa		27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	PHPT1	Q9NRX4	125 aa	Predicted RBP	27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	ARMC1	Q9NVT9	282 aa		27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	MMP17	Q9ULZ9	603 aa		27.95	■■■□□ 2.07
CSNK1E-205	ENST00000405675	C1GALT1C1L	P0DN25	315 aa		27.95	■■■□□ 2.06
CSNK1E-205	ENST00000405675	HSD3B1	P14060	373 aa		27.95	■■■□□ 2.06
CSNK1E-205	ENST00000405675	HSD3B2	P26439	372 aa		27.95	■■■□□ 2.06
CSNK1E-205	ENST00000405675	IGFALS	P35858	605 aa		27.95	■■■□□ 2.06
CSNK1E-205	ENST00000405675	RPS13	P62277	151 aa	Known RBP	27.95	■■■□□ 2.06
CSNK1E-205	ENST00000405675	RAE1	P78406	368 aa	Known RBP	27.95	■■■□□ 2.06
CSNK1E-205	ENST00000405675	MEF2A	Q02078	507 aa	Predicted RBP	27.95	■■■□□ 2.06
CSNK1E-205	ENST00000405675	KIAA1161	Q6NSJ0	714 aa		27.95	■■■□□ 2.06
CSNK1E-205	ENST00000405675	IRGC	Q6NXR0	463 aa		27.95	■■■□□ 2.06
CSNK1E-205	ENST00000405675	AMIGO2	Q86SJ2	522 aa		27.95	■■■□□ 2.06
CSNK1E-205	ENST00000405675	FAM124A	Q86V42	546 aa		27.95	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms