RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 KIF19Q2TAC6 998 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 PAGE2BQ5JRK9 111 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 FRG2Q64ET8 278 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 SELENOMQ8WWX9 145 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 REPS1Q96D71 796 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 WDR34Q96EX3 536 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 SLC6A18Q96N87 628 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 CAMK1GQ96NX5 476 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 RAB3IPQ96QF0 476 aaPredicted RBP20.29■□□□□ 0.84
TPM1-208ENST00000404484 FRG2BQ96QU4 278 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 BTBD10Q9BSF8 475 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 EFCAB11Q9BUY7 163 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 TMEM168Q9H0V1 697 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 CAPN10Q9HC96 672 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 CNOT1A5YKK6 2376 aaKnown RBP20.29■□□□□ 0.84
TPM1-208ENST00000404484 H0YIV9 168 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 PSMD12O00232 456 aaPredicted RBP20.29■□□□□ 0.84
TPM1-208ENST00000404484 NPPBP16860 134 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 ACADVLP49748 655 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 RAB28P51157 221 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 RACK1P63244 317 aaKnown RBP20.29■□□□□ 0.84
TPM1-208ENST00000404484 LAPTM5Q13571 262 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 DOC2AQ14183 400 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 FASTKQ14296 549 aaKnown RBP20.29■□□□□ 0.84
TPM1-208ENST00000404484 FAM219BQ5XKK7 198 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 ATG9BQ674R7 924 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 DUS1LQ6P1R4 473 aaKnown RBP20.29■□□□□ 0.84
TPM1-208ENST00000404484 SLCO4C1Q6ZQN7 724 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 Q6ZSR9 355 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 PARGQ86W56 976 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 PARP9Q8IXQ6 854 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 MIER2Q8N344 545 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 OR2T11Q8NH01 316 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 HMGCLL1Q8TB92 370 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 SLC5A11Q8WWX8 675 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 TBC1D29Q9UFV1 150 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 PLAGL1Q9UM63 463 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 SLC6A14Q9UN76 642 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 PCDHGA11Q9Y5H2 935 aa20.29■□□□□ 0.84
TPM1-208ENST00000404484 B2RBV5 119 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 LSM1O15116 133 aaKnown RBP20.28■□□□□ 0.84
TPM1-208ENST00000404484 GYG2O15488 501 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 ALDOCP09972 364 aaKnown RBP20.28■□□□□ 0.84
TPM1-208ENST00000404484 GNSP15586 552 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 PCSK2P16519 638 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 CD38P28907 300 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 EMX2Q04743 252 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 CYLC2Q14093 348 aaPredicted RBP20.28■□□□□ 0.84
TPM1-208ENST00000404484 FZD2Q14332 565 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 DNAL1Q4LDG9 190 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 C6orf136Q5SQH8 315 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 RABEPKQ7Z6M1 372 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 TMPRSS11BQ86T26 416 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 SFRP1Q8N474 314 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 FNDC5Q8NAU1 212 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 GPBAR1Q8TDU6 330 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 NEIL2Q969S2 332 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 IL17FQ96PD4 163 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 C1orf21Q9H246 121 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 KIR3DX1Q9H7L2 352 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 AIG1Q9NVV5 245 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 TMEM45AQ9NWC5 275 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 SUSD2Q9UGT4 822 aa20.28■□□□□ 0.84
TPM1-208ENST00000404484 LRP4O75096 1905 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 OR52A4PA6NMU1 304 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 H0YHG0 523 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 CDX4O14627 284 aaPredicted RBP20.27■□□□□ 0.84
TPM1-208ENST00000404484 SCAMP1O15126 338 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 BCAT2O15382 392 aaPredicted RBP20.27■□□□□ 0.84
TPM1-208ENST00000404484 PRAMEF4O60810 478 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 C1GALT1C1LP0DN25 315 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 F3P13726 295 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 HSD3B1P14060 373 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 HSD3B2P26439 372 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 AK4P27144 223 aaPredicted RBP20.27■□□□□ 0.84
TPM1-208ENST00000404484 PKLRP30613 574 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 MXRA7P84157 204 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 CSTF3Q12996 717 aaKnown RBP20.27■□□□□ 0.84
TPM1-208ENST00000404484 EIF2B5Q13144 721 aaKnown RBP20.27■□□□□ 0.84
TPM1-208ENST00000404484 HIST2H2ACQ16777 129 aaPredicted RBP20.27■□□□□ 0.84
TPM1-208ENST00000404484 SGO1Q5FBB7 561 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 PRAMEF9Q5VWM5 478 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 HIST2H2AA3Q6FI13 130 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 SLC30A9Q6PML9 568 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 SNX32Q86XE0 403 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 PHACTR4Q8IZ21 702 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 NETO1Q8TDF5 533 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 UBE2E3Q969T4 207 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 SH3KBP1Q96B97 665 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 RTKNQ9BST9 563 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 MENTQ9BUN1 341 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 EDEM2Q9BV94 578 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 DLL3Q9NYJ7 618 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 CCL27Q9Y4X3 112 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 SPTBN2O15020 2390 aa20.27■□□□□ 0.84
TPM1-208ENST00000404484 A0A1B0GTW7 788 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 RSL1D1O76021 490 aaKnown RBP20.26■□□□□ 0.83
TPM1-208ENST00000404484 PDYNP01213 254 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 CTSEP14091 401 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 SLC2A4P14672 509 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms