RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TUBA3EQ6PEY2 450 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 LANCL3Q6ZV70 420 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 OR2L3Q8NG85 312 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 OR2A1Q8NGT9 310 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ZUFSPQ96AP4 578 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SCMH1Q96GD3 660 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 VPS50Q96JG6 964 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MAGED4Q96JG8 741 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 FRMD6Q96NE9 622 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 RIC8BQ9NVN3 520 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TRPC4Q9UBN4 977 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 RUVBL2Q9Y230 463 aaKnown RBP11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 R3HDM2Q9Y2K5 976 aaKnown RBP11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 NFS1Q9Y697 457 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 RTTNQ86VV8 2226 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ANK3Q12955 4377 aaKnown RBP11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 IGKV1-8A0A0C4DH67 115 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 OR2A25A4D2G3 310 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MROH6A6NGR9 719 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SEC24DO94855 1032 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ZRANB2O95218 330 aaKnown RBP eCLIP11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 METTL18O95568 372 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 FTH1P02794 183 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 HEXBP07686 556 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CD96P40200 585 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SLC1A1P43005 524 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 BDKRB1P46663 353 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CASP6P55212 293 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 HSPA14Q0VDF9 509 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TCEAL1Q15170 157 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 LONRF1Q17RB8 773 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SYTL3Q4VX76 610 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CCDC38Q502W7 563 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ZNF468Q5VIY5 522 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ABHD17BQ5VST6 288 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ZNF534Q76KX8 674 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TMTC1Q8IUR5 882 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SPNS2Q8IVW8 549 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 DCUN1D3Q8IWE4 304 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 KATNAL2Q8IYT4 538 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 KRT222Q8N1A0 295 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 OR13J1Q8NGT2 312 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ACTL9Q8TC94 416 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 STYXQ8WUJ0 223 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SDCCAG3Q96C92 435 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SPATA13Q96N96 652 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 UCK2Q9BZX2 261 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TGIF2Q9GZN2 237 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CXXC4Q9H2H0 198 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 LIME1Q9H400 295 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 DLL4Q9NR61 685 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SLC2A6Q9UGQ3 507 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TFR2Q9UP52 801 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 RUVBL1Q9Y265 456 aaKnown RBP11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 AAR2Q9Y312 384 aaKnown RBP11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ALG6Q9Y672 507 aa11.26□□□□□ -0.61
SPTLC1P3-201ENST00000403408 NKX2-6A6NCS4 301 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 A8MUI8 341 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 APOC4-APOC2K7ER74 178 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 P2RX6O15547 441 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PSTPIP1O43586 416 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ASNA1O43681 348 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SPOPO43791 374 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 APOC2P02655 101 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MSNP26038 577 aaKnown RBP11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 UBASH3AP57075 661 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ALDH6A1Q02252 535 aaKnown RBP11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 KRTCAP3Q53RY4 240 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ACER2Q5QJU3 275 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ITPRIPL1Q6GPH6 555 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 AADACL2Q6P093 401 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 LUZP1Q86V48 1076 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ZNF227Q86WZ6 799 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TGIF2LYQ8IUE0 185 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CRLF3Q8IUI8 442 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 RPRMLQ8N4K4 120 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PHF10Q8WUB8 498 aaKnown RBP11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SLC22A18Q96BI1 424 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ZNF778Q96MU6 729 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 YIPF2Q9BWQ6 316 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 VN1R1Q9GZP7 353 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 NAT10Q9H0A0 1025 aaKnown RBP11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 GPAMQ9HCL2 828 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 INTS7Q9NVH2 962 aaKnown RBP11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 NBEAL1Q6ZS30 2694 aa11.25□□□□□ -0.61
SPTLC1P3-201ENST00000403408 A0A0A6YYC8 382 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 E9PLN8 166 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 I3L1I5 382 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 NEURL1O76050 574 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TOXO94900 526 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 C1orf105O95561 183 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CXCR2P25025 360 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 AOAHP28039 575 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PTGER1P34995 402 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PLOD1Q02809 727 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 OR1C1Q15619 314 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MUM1Q2TAK8 710 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ODF2Q5BJF6 829 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 UNC5DQ6UXZ4 953 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PRSS41Q7RTY9 318 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms