RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 TRIM38O00635 465 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 VPS4BO75351 444 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 C9P02748 559 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 CKMT1AP12532 417 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 HSD3B1P14060 373 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 CXCR2P25025 360 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 MPSTP25325 297 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 HSD3B2P26439 372 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 CMPK1P30085 196 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 MRPL19P49406 292 aaKnown RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 DUSP3P51452 185 aaPredicted RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 MAZP56270 477 aaKnown RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 BNIP1Q12981 228 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 XKR7Q5GH72 579 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 ZNF425Q6IV72 752 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 LETMD1Q6P1Q0 360 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 EPGNQ6UW88 154 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 TRPM8Q7Z2W7 1104 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 TRIM46Q7Z4K8 759 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 CPLX4Q7Z7G2 160 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 OOSP2Q86WS3 158 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 WDR75Q8IWA0 830 aaKnown RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 SLC35F3Q8IY50 421 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 OR4F6Q8NGB9 312 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 BAHD1Q8TBE0 780 aaPredicted RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 PATE1Q8WXA2 126 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 REPS1Q96D71 796 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 CCDC28BQ9BUN5 200 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 TRIM55Q9BYV6 548 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 CAAP1Q9H8G2 361 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 ZNF395Q9H8N7 513 aaPredicted RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 KCNK13Q9HB14 408 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 SEMA4BQ9NPR2 832 aaPredicted RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 PFDN4Q9NQP4 134 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 PNPOQ9NVS9 261 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 ACTR10Q9NZ32 417 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 POMT2Q9UKY4 750 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 APOBEC2Q9Y235 224 aaKnown RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 USH1CQ9Y6N9 552 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 ARHGEF17Q96PE2 2063 aaPredicted RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 PIPSLA2A3N6 862 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 EME2A4GXA9 379 aaPredicted RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 FOXE1O00358 373 aaPredicted RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 HDAC3O15379 428 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 FLRT2O43155 660 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 SNX3O60493 162 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 SDC3O75056 442 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 ACPPP15309 386 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 CCR10P46092 362 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 CAPZBP47756 277 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 CCR8P51685 355 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 ARFIP1P53367 373 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 CDH13P55290 713 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 PAGE2BQ5JRK9 111 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 SH2D4BQ5SQS7 431 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 WDR74Q6RFH5 385 aaPredicted RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 C17orf64Q86WR6 236 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 MINDY1Q8N5J2 469 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 PPFIBP2Q8ND30 876 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 OR2L3Q8NG85 312 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 OR52B6Q8NGF0 335 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 WDR20Q8TBZ3 569 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 ACTRT2Q8TDY3 377 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 C10orf82Q8WW14 230 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 N4BP2L2Q92802 583 aaPredicted RBP6.6□□□□□ -1.35
USP16-203ENST00000399975 NAT6Q93015 286 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 NEIL2Q969S2 332 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 ZUFSPQ96AP4 578 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 ESAMQ96AP7 390 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 MED8Q96G25 268 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 BRF2Q9HAW0 419 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 TNFRSF12AQ9NP84 129 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 SIRT5Q9NXA8 310 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 PADI4Q9UM07 663 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 SNX7Q9UNH6 387 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 C15orf41Q9Y2V0 281 aa6.6□□□□□ -1.35
USP16-203ENST00000399975 CACNA1EQ15878 2313 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 MN1Q10571 1320 aaPredicted RBP6.59□□□□□ -1.35
USP16-203ENST00000399975 ADAMTS20P59510 1910 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 TDRD6O60522 2096 aaKnown RBP6.59□□□□□ -1.35
USP16-203ENST00000399975 A0A1B0GTL3 188 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 TRBC2A0A5B9 178 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 KRT87PA6NCN2 255 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 E7EQ34 232 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 MANBAO00462 879 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 PPP6CO00743 305 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 GIPC1O14908 333 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 TOX3O15405 576 aaPredicted RBP6.59□□□□□ -1.35
USP16-203ENST00000399975 UBXN7O94888 489 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 OR4F21O95013 312 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 LMNAP02545 664 aaKnown RBP6.59□□□□□ -1.35
USP16-203ENST00000399975 GP1BAP07359 652 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 PRR35P0CG20 571 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 UGT2B7P16662 529 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 CD22P20273 847 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 TGM1P22735 817 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 CALRP27797 417 aaKnown RBP6.59□□□□□ -1.35
USP16-203ENST00000399975 PIK3CBP42338 1070 aa6.59□□□□□ -1.35
USP16-203ENST00000399975 CSTF3Q12996 717 aaKnown RBP6.59□□□□□ -1.35
USP16-203ENST00000399975 CHIT1Q13231 466 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms