RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CMPK1P30085 196 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ETV4P43268 484 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ALDH18A1P54886 795 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CSNK1G2P78368 415 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 HSD11B2P80365 405 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ABATP80404 500 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 NFKB2Q00653 900 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MPP2Q14168 576 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PCBP2Q15366 365 aaKnown RBP eCLIP11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 GPR19Q15760 415 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 DEFB110Q30KQ9 67 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TTMPQ5BVD1 217 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CATSPEREQ5SY80 951 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 THEMIS2Q5TEJ8 643 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 RPS27LQ71UM5 84 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 LRRC70Q7Z2Q7 622 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CROCCP2Q86T23 111 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ABHD11Q8NFV4 315 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 WDR36Q8NI36 951 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TCP10LQ8TDR4 215 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PHF21BQ96EK2 531 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MOCOSQ96EN8 888 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TSNARE1Q96NA8 513 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FCRL4Q96PJ5 515 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SH3GL2Q99962 352 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PLCD4Q9BRC7 762 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 STRADBQ9C0K7 418 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MRPS30Q9NP92 439 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ACSS2Q9NR19 701 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SENP1Q9P0U3 644 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PILRAQ9UKJ1 303 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 GRID1Q9ULK0 1009 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PLLPQ9Y342 182 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MDC1Q14676 2089 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 B4E171 279 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 C9orf172C9J069 976 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 E7EQ34 232 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 STX16-NPEPL1H3BU86 382 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 H7BY64 318 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 E2F3O00716 465 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 STX16O14662 325 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 HAT1O14929 419 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CCNT2O60583 730 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CCNDBP1O95273 360 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TIAF1O95411 115 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MSL3P1P0C860 447 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MYZAPP0CAP1 466 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SPTBP11277 2137 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CD22P20273 847 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ATP5F1P24539 256 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 EEF1DP29692 281 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CSTF2P33240 577 aaKnown RBP eCLIP11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TSPAN7P41732 249 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MLLT3P42568 568 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CCT5P48643 541 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SHC2P98077 582 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MC2RQ01718 297 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CDC16Q13042 620 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 E2F2Q14209 437 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PCLAFQ15004 111 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CCDC153Q494R4 210 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FAM219BQ5XKK7 198 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FBXO42Q6P3S6 717 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ZYG11AQ6WRX3 759 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SLCO4C1Q6ZQN7 724 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 RNF44Q7L0R7 432 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 C17orf64Q86WR6 236 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FAM129CQ86XR2 697 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PLD3Q8IV08 490 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 OR4K1Q8NGD4 311 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ZUFSPQ96AP4 578 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ZNF501Q96CX3 271 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TCTN2Q96GX1 697 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PRAP1Q96NZ9 151 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 NSUN5Q96P11 429 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TMEM237Q96Q45 408 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SMC6Q96SB8 1091 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CMKLR1Q99788 373 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 HAUS8Q9BT25 410 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 C1QTNF3Q9BXJ4 246 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PCBD2Q9H0N5 130 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CNOT10Q9H9A5 744 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ZBTB26Q9HCK0 441 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SSU72Q9NP77 194 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 DNAJC11Q9NVH1 559 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SOHLH2Q9NX45 425 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ANKMY1Q9P2S6 941 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PISDQ9UG56 409 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PCTPQ9UKL6 214 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MSRB2Q9Y3D2 182 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PCDHGA8Q9Y5G5 932 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ACTL7BQ9Y614 415 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 WDFY3Q8IZQ1 3526 aa11.91□□□□□ -0.5
HLA-DQB1-203ENST00000399082 A0A1B0GTL3 188 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 K7EPI3 171 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SMIM24O75264 130 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 VARSP26640 1264 aaKnown RBP11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SNRPNP63162 240 aaKnown RBP11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 GABREP78334 506 aa11.9□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MEF2AQ02078 507 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms