RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 EBNA1BP2Q99848 306 aaKnown RBP12.82□□□□□ -0.36
VCX3A-202ENST00000398729 PLCD4Q9BRC7 762 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 NUDT9Q9BW91 350 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 WDR54Q9H977 334 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 SLC6A20Q9NP91 592 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 P4HTMQ9NXG6 502 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 ZC3H7BQ9UGR2 993 aaKnown RBP12.82□□□□□ -0.36
VCX3A-202ENST00000398729 TAC3Q9UHF0 121 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 TRMT6Q9UJA5 497 aaKnown RBP12.82□□□□□ -0.36
VCX3A-202ENST00000398729 NXT1Q9UKK6 140 aaKnown RBP12.82□□□□□ -0.36
VCX3A-202ENST00000398729 SAR1BQ9Y6B6 198 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 PCSK5Q92824 1860 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 LOC105369274A0A096LPK9 316 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 LOC102723532A0A0G2JNH3 316 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 TTLL8A6PVC2 850 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 E7ENX8 843 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 SMAPO00193 183 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 NRP2O60462 931 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 KLHL41O60662 606 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 BANF1O75531 89 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 AGFG2O95081 481 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 UMODP07911 640 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 SKIV2L2P42285 1042 aaKnown RBP12.81□□□□□ -0.36
VCX3A-202ENST00000398729 OR1D4P47884 311 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 RGS4P49798 205 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 FOXL2P58012 376 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 YBX1P67809 324 aaKnown RBP12.81□□□□□ -0.36
VCX3A-202ENST00000398729 TAP2Q03519 686 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 PRDX1Q06830 199 aaKnown RBP12.81□□□□□ -0.36
VCX3A-202ENST00000398729 MORF4L2Q15014 288 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 MUM1Q2TAK8 710 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 BBS9Q3SYG4 887 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 NADK2Q4G0N4 442 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 MSS51Q4VC12 460 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 ICE2Q659A1 982 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 FBXO42Q6P3S6 717 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 CYHR1Q6ZMK1 362 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 UBE2R2Q712K3 238 aaPredicted RBP12.81□□□□□ -0.36
VCX3A-202ENST00000398729 PPP1R32Q7Z5V6 425 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 CREG2Q8IUH2 290 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 OR4N4Q8N0Y3 316 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 PDIK1LQ8N165 341 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 GALNT11Q8NCW6 608 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 PPFIBP2Q8ND30 876 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 ZNF480Q8WV37 535 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.81□□□□□ -0.36
VCX3A-202ENST00000398729 NDNQ99608 321 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 NAPGQ99747 312 aaPredicted RBP12.81□□□□□ -0.36
VCX3A-202ENST00000398729 SLC26A1Q9H2B4 701 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 TAS2R13Q9NYV9 303 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 ANKRD12Q6UB98 2062 aa12.81□□□□□ -0.36
VCX3A-202ENST00000398729 H0YGG7 62 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 CCDC188H7C350 402 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 AGPSO00116 658 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 VPS4BO75351 444 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 EZRP15311 586 aaKnown RBP12.8□□□□□ -0.36
VCX3A-202ENST00000398729 MMP11P24347 488 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 IVDP26440 423 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 PAFAH1B1P43034 410 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 CARSP49589 748 aaKnown RBP12.8□□□□□ -0.36
VCX3A-202ENST00000398729 ARF3P61204 181 aaPredicted RBP12.8□□□□□ -0.36
VCX3A-202ENST00000398729 ABATP80404 500 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 RAPSNQ13702 412 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 NKG7Q16617 165 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 FHL5Q5TD97 284 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 THEMIS2Q5TEJ8 643 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 VWA5B1Q5TIE3 1220 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 ZNF425Q6IV72 752 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 PRMT9Q6P2P2 845 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 KIAA0408Q6ZU52 694 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 COX15Q7KZN9 410 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 PIWIL4Q7Z3Z4 852 aaKnown RBP12.8□□□□□ -0.36
VCX3A-202ENST00000398729 PAQR7Q86WK9 346 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 CNTN4Q8IWV2 1026 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 PALM2Q8IXS6 379 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 METTL27Q8N6F8 245 aaPredicted RBP12.8□□□□□ -0.36
VCX3A-202ENST00000398729 CERS2Q96G23 380 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 VPS50Q96JG6 964 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 PDLIM2Q96JY6 352 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 CABS1Q96KC9 395 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 SPSB2Q99619 263 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 SMAD5Q99717 465 aaKnown RBP12.8□□□□□ -0.36
VCX3A-202ENST00000398729 ZNF304Q9HCX3 659 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 PPANQ9NQ55 473 aaKnown RBP12.8□□□□□ -0.36
VCX3A-202ENST00000398729 ABCF3Q9NUQ8 709 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 C5AR2Q9P296 337 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 CTSFQ9UBX1 484 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 CDC23Q9UJX2 597 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 VPS4AQ9UN37 437 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 MAU2Q9Y6X3 613 aa12.8□□□□□ -0.36
VCX3A-202ENST00000398729 IGKV1-8A0A0C4DH67 115 aa12.79□□□□□ -0.36
VCX3A-202ENST00000398729 ALPPP05187 535 aa12.79□□□□□ -0.36
VCX3A-202ENST00000398729 C8GP07360 202 aa12.79□□□□□ -0.36
VCX3A-202ENST00000398729 COL8A1P27658 744 aa12.79□□□□□ -0.36
VCX3A-202ENST00000398729 IMPA1P29218 277 aa12.79□□□□□ -0.36
VCX3A-202ENST00000398729 ELK3P41970 407 aa12.79□□□□□ -0.36
VCX3A-202ENST00000398729 EMP3P54852 163 aa12.79□□□□□ -0.36
VCX3A-202ENST00000398729 RELAQ04206 551 aa12.79□□□□□ -0.36
VCX3A-202ENST00000398729 OCA2Q04671 838 aa12.79□□□□□ -0.36
VCX3A-202ENST00000398729 MYBPC3Q14896 1274 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms