RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 CUTCQ9NTM9 273 aa13.71□□□□□ -0.21
RAB1A-201ENST00000398529 TCAF1Q9Y4C2 921 aa13.71□□□□□ -0.21
RAB1A-201ENST00000398529 HS3ST3B1Q9Y662 390 aa13.71□□□□□ -0.21
RAB1A-201ENST00000398529 CSMD1Q96PZ7 3565 aa13.71□□□□□ -0.21
RAB1A-201ENST00000398529 TRAV17A0A0B4J275 112 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 TRGV8A0A0C4DH27 118 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 MROH6A6NGR9 719 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 SDR42E2A6NKP2 422 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 CCL22O00626 93 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 MAP2K7O14733 419 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 OR56A5P0C7T3 313 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 ACPPP15309 386 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 PLTPP55058 493 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 ARL4CP56559 192 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 RBPJQ06330 500 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 INAQ16352 499 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 ZDHHC24Q6UX98 284 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 RPTNQ6XPR3 784 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 SHISA6Q6ZSJ9 500 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 PDIK1LQ8N165 341 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 MPP5Q8N3R9 675 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 SUN3Q8TAQ9 357 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 STYXQ8WUJ0 223 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 SIGLEC10Q96LC7 697 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 PWWP2AQ96N64 755 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 CRB3Q9BUF7 120 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 SLC22A11Q9NSA0 550 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 RIMKLBQ9ULI2 386 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 SOX13Q9UN79 622 aa13.7□□□□□ -0.22
RAB1A-201ENST00000398529 F8P00451 2351 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 CCL21O00585 134 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 PCDH17O14917 1159 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 ONECUT2O95948 504 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 HPP00738 406 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 CRYABP02511 175 aaKnown RBP13.69□□□□□ -0.22
RAB1A-201ENST00000398529 CTSBP07858 339 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 MAGP20916 626 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 FDXRP22570 491 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 CXCR2P25025 360 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 PSMA3P25788 255 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 HTR1EP28566 365 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 CDKN1CP49918 316 aaPredicted RBP13.69□□□□□ -0.22
RAB1A-201ENST00000398529 RAB28P51157 221 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 KCNK10P57789 538 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 DHX9Q08211 1270 aaKnown RBP13.69□□□□□ -0.22
RAB1A-201ENST00000398529 SF1Q15637 639 aaKnown RBP13.69□□□□□ -0.22
RAB1A-201ENST00000398529 BBS9Q3SYG4 887 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 ZNF658BQ4V348 819 aaPredicted RBP13.69□□□□□ -0.22
RAB1A-201ENST00000398529 MSS51Q4VC12 460 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 DNAJC21Q5F1R6 531 aaKnown RBP13.69□□□□□ -0.22
RAB1A-201ENST00000398529 TSTD2Q5T7W7 516 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 ARMC3Q5W041 872 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 TTC23LQ6PF05 361 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 NLRP9Q7RTR0 991 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 MRGPRGQ86SM5 289 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 AGGF1Q8N302 714 aaeCLIP13.69□□□□□ -0.22
RAB1A-201ENST00000398529 ZNF808Q8N4W9 903 aaPredicted RBP13.69□□□□□ -0.22
RAB1A-201ENST00000398529 CATSPER1Q8NEC5 780 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 OR11G2Q8NGC1 345 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 FBXO25Q8TCJ0 367 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 NR4A3Q92570 626 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 PEX13Q92968 403 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 DNAJC1Q96KC8 554 aaKnown RBP13.69□□□□□ -0.22
RAB1A-201ENST00000398529 SPSB2Q99619 263 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 SELENOSQ9BQE4 189 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 KIFC1Q9BW19 673 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 TSSK1BQ9BXA7 367 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.69□□□□□ -0.223e-8■■■□□ 16.7
RAB1A-201ENST00000398529 CHRAC1Q9NRG0 131 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 NLE1Q9NVX2 485 aaPredicted RBP13.69□□□□□ -0.22
RAB1A-201ENST00000398529 ITGB1BP2Q9UKP3 347 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 PLAGL1Q9UM63 463 aa13.69□□□□□ -0.22
RAB1A-201ENST00000398529 MRPS2Q9Y399 296 aaKnown RBP13.69□□□□□ -0.22
RAB1A-201ENST00000398529 NSG1A0A0A6YYJ2 146 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 TRBV5-4A0A0C4DH59 114 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 MAGEB16A2A368 324 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 H7C0S8 307 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 BANF1O75531 89 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 S1PR4O95977 384 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 SNRPB2P08579 225 aaKnown RBP13.68□□□□□ -0.22
RAB1A-201ENST00000398529 ACADLP28330 430 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 OR1D4P47884 311 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 AP2B1P63010 937 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 CBLBQ13191 982 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 ITIH4Q14624 930 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 DBN1Q16643 649 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 CASC4Q6P4E1 433 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 BNC2Q6ZN30 1099 aaPredicted RBP13.68□□□□□ -0.22
RAB1A-201ENST00000398529 IFT20Q8IY31 132 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 RAB42Q8N4Z0 105 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 FLVCR1-AS1Q8TAF5 88 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 GSDMBQ8TAX9 411 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 IFT81Q8WYA0 676 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 MIEF2Q96C03 454 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 CDKN2AIPNLQ96HQ2 116 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 LURAP1Q96LR2 239 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 ZNF778Q96MU6 729 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 FAM129AQ9BZQ8 928 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 ZNF160Q9HCG1 818 aa13.68□□□□□ -0.22
RAB1A-201ENST00000398529 ZNF304Q9HCX3 659 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms