RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 UGDHO60701 494 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 INMTO95050 263 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 PTPN2P17706 415 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 PRKACGP22612 351 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 AQP1P29972 269 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 GGT5P36269 586 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 DCTP40126 519 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 SLC11A2P49281 568 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 FADDQ13158 208 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 E2F2Q14209 437 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 GNASQ5JWF2 1037 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CSGALNACT1Q8TDX6 532 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF431Q8TF32 576 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 NELL1Q92832 810 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CXorf40BQ96DE9 158 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 PDCD10Q9BUL8 212 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 HTATIP2Q9BUP3 242 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 SAV1Q9H4B6 383 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 PDFQ9HBH1 243 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 KIAA1217Q5T5P2 1943 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 TRBV5-4A0A0C4DH59 114 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 XPNPEP2O43895 674 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 KHDRBS3O75525 346 aaKnown RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CCNDBP1O95273 360 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 ALDH1A1P00352 501 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CSF2P04141 144 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CCNYL3P0C7X3 344 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CENPAP49450 140 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 RBBP4Q09028 425 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 DLEU7Q6UYE1 221 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 TAF8Q7Z7C8 310 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 IQCF2Q8IXL9 164 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 RBFAQ8N0V3 343 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 DCBLD1Q8N8Z6 715 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 EEF1AKMT1Q8WVE0 214 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 Q96MT0 163 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 TM9SF3Q9HD45 589 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 MCUBQ9NWR8 336 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 LYVE1Q9Y5Y7 322 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 SLC28A1O00337 649 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CXCR6O00574 342 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 UBFD1O14562 309 aaKnown RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 ATE1O95260 518 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CBSLP0DN79 551 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 DGKAP23743 735 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 RPL10P27635 214 aaKnown RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CBSP35520 551 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 ATN1P54259 1190 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CLDN8P56748 225 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CDC20Q12834 499 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 SNAPC1Q16533 368 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 MS4A13Q5J8X5 152 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 DSG4Q86SJ6 1040 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CPA6Q8N4T0 437 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 DTWD1Q8N5C7 304 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 PCSK9Q8NBP7 692 aaKnown RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 LILRB4Q8NHJ6 448 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 SHKBP1Q8TBC3 707 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CNIH3Q8TBE1 160 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 PIGKQ92643 395 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 GTF2H4Q92759 462 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 MYO19Q96H55 970 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CCDC120Q96HB5 630 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 PSD2Q9BQI7 771 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 GOLGA2P5Q9HBQ8 144 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 TLR8Q9NR97 1041 aaKnown RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 COMMD3Q9UBI1 195 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 SLC2A6Q9UGQ3 507 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 WDR81Q562E7 1941 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 ELOVL7A1L3X0 281 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 A6NL46 340 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 TREHO43280 583 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 AQP9O43315 295 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 IFNA7P01567 189 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 ITGAMP11215 1152 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 BDNFP23560 247 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 OPRL1P41146 370 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 SNRPD2P62316 118 aaKnown RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 SRSF11Q05519 484 aaKnown RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 TBCEQ15813 527 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 SPRYD7Q5W111 196 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 GPR153Q6NV75 609 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CCBE1Q6UXH8 406 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 SLC24A5Q71RS6 500 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 GPR149Q86SP6 731 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 NATD1Q8N6N6 113 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 OR10A6Q8NH74 314 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CAPN10Q9HC96 672 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 SCUBE2Q9NQ36 999 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 RDH8Q9NYR8 311 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 ERVK-18Q9QC07 812 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 MKLN1Q9UL63 735 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 ARHGEF33A8MVX0 844 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 MUSKO15146 869 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SUV39H1O43463 412 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ACSL4O60488 711 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SOCS5O75159 536 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ECI2O75521 394 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 TRAPPC2P0DI81 140 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 TRAPPC2BP0DI82 140 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms