RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 HEATR5BQ9P2D3 2071 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 FREM2Q5SZK8 3169 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 E7EQ34 232 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 NDUFAB1O14561 156 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 AZIN1O14977 448 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 PCDHGA12O60330 932 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 PEBP1P30086 187 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 SF3A3Q12874 501 aaKnown RBP eCLIP16.34■□□□□ 0.213e-13■■■■■ 49.7
TSPAN4-205ENST00000397406 E2F2Q14209 437 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 CLEC6AQ6EIG7 209 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 TMEM26Q6ZUK4 368 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 MILR1Q7Z6M3 343 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 GATAD2AQ86YP4 633 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 ADGRF3Q8IZF5 1079 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 CLYBLQ8N0X4 340 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 L3MBTL4Q8NA19 623 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 AVL9Q8NBF6 648 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 KYQ8NBH2 561 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 OR4E2Q8NGC2 313 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 RHBDD1Q8TEB9 315 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 NEIL2Q969S2 332 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 KCNA7Q96RP8 456 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 TRPS1Q9UHF7 1281 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 KCNE2Q9Y6J6 123 aa16.34■□□□□ 0.21
TSPAN4-205ENST00000397406 IGF2RP11717 2491 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 KCNE1BA0A087WTH5 132 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 SLCO1B7G3V0H7 640 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 BTN3A3O00478 584 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 PPM1DO15297 605 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 HDAC3O15379 428 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 FLRT2O43155 660 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 UGDHO60701 494 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 WFS1O76024 890 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 ENO1P06733 434 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 GNAZP19086 355 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 PSMB5P28074 263 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 CCT8P50990 548 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 PLCL1Q15111 1095 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 GGTA1PQ4G0N0 100 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 C14orf28Q4W4Y0 310 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 THEMIS2Q5TEJ8 643 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 SLCO4C1Q6ZQN7 724 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 CDYL2Q8N8U2 506 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 OR2A1Q8NGT9 310 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 C10orf82Q8WW14 230 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 FAR2Q96K12 515 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 HAUS8Q9BT25 410 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 PCBD2Q9H0N5 130 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 SRMSQ9H3Y6 488 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 ACTR8Q9H981 624 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 UCK1Q9HA47 277 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 SPHK1Q9NYA1 384 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 NLGN3Q9NZ94 848 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 VTI1BQ9UEU0 232 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 TAC3Q9UHF0 121 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 DCTN4Q9UJW0 460 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 RNF11Q9Y3C5 154 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 FIS1Q9Y3D6 152 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 DYRK1BQ9Y463 629 aa16.33■□□□□ 0.2
TSPAN4-205ENST00000397406 TAF4O00268 1085 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 CLGNO14967 610 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 CLDN9O95484 217 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 JUNP05412 331 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 CAPN1P07384 714 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 CHRM5P08912 532 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 UROSP10746 265 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 HGFP14210 728 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 CD22P20273 847 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 ARL1P40616 181 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 CASP2P42575 452 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 AQP5P55064 265 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 YBX1P67809 324 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 CHIT1Q13231 466 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 AFAP1L2Q8N4X5 818 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 ARL10Q8N8L6 244 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 WDR34Q96EX3 536 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 PRR11Q96HE9 360 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 SIKE1Q9BRV8 207 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 ACAT2Q9BWD1 397 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 STN1Q9H668 368 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 ZMIZ1Q9ULJ6 1067 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 TIMM22Q9Y584 194 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 PCDHB11Q9Y5F2 797 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 DNAJC15Q9Y5T4 150 aa16.32■□□□□ 0.2
TSPAN4-205ENST00000397406 SERPINB3P29508 390 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 IRF8Q02556 426 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 BTKQ06187 659 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 DOC2AQ14183 400 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 TBCCQ15814 346 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 PDCD2Q16342 344 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 XKR6Q5GH73 641 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 CATSPEREQ5SY80 951 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 GKAP1Q5VSY0 366 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 LIPJQ5W064 366 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 ATG9BQ674R7 924 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 TMPRSS11BQ86T26 416 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 ZNF761Q86XN6 746 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 SLC35F3Q8IY50 421 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 OR4C6Q8NH72 309 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms