RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SLC6A20Q9NP91 592 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 SEMA4BQ9NPR2 832 aaPredicted RBP22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 INTS9Q9NV88 658 aaKnown RBP22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 CUEDC1Q9NWM3 386 aaPredicted RBP22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 KLHL20Q9Y2M5 609 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 A8MU76 341 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 E7EQ34 232 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 KATNA1O75449 491 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 CDK4P11802 303 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 TSPAN8P19075 237 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 EPORP19235 508 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 GRIA3P42263 894 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 NAA20P61599 178 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 INSM1Q01101 510 aaPredicted RBP22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 DHRS13Q6UX07 377 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 RBM44Q6ZP01 1051 aaKnown RBP22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 TMPRSS11BQ86T26 416 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 TRPC4APQ8TEL6 797 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 ATP6V1E2Q96A05 226 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 DPH7Q9BTV6 452 aa22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 NOL11Q9H8H0 719 aaKnown RBP22.71■■□□□ 1.23
TSPAN4-203ENST00000397397 IGHV5-10-1A0A0J9YXX1 117 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 SLC9B1P1A6NJY1 282 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 H2AFYO75367 372 aaKnown RBP22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 KCNK5O95279 499 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 ST6GAL1P15907 406 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 MAGP20916 626 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 BGNP21810 368 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 CATSPEREQ5SY80 951 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 FIGLAQ6QHK4 219 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 PRSS42Q7Z5A4 293 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 ADCK2Q7Z695 626 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 DYDC1Q8WWB3 177 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 TRAPPC9Q96Q05 1148 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 ZBTB26Q9HCK0 441 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 PDP2Q9P2J9 529 aa22.7■■□□□ 1.22
TSPAN4-203ENST00000397397 IGHV5-51A0A0C4DH38 117 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 IGKV1-8A0A0C4DH67 115 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 H7BY64 318 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 OR7A17O14581 309 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 THRAP10827 490 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 HRH2P25021 359 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 ARL1P40616 181 aaPredicted RBP22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 CCR8P51685 355 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 CCNG1P51959 295 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 IRF8Q02556 426 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 NAA25Q14CX7 972 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 PHF19Q5T6S3 580 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 NXPE4Q6UWF7 544 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 FRMD7Q6ZUT3 714 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 SLITRK4Q8IW52 837 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 CARFQ8N187 725 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 FAM76AQ8TAV0 307 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 CCDC74BQ96LY2 380 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 PRAP1Q96NZ9 151 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 PELI2Q9HAT8 420 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 TMEM184CQ9NVA4 438 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 SNX7Q9UNH6 387 aa22.69■■□□□ 1.22
TSPAN4-203ENST00000397397 COL27A1Q8IZC6 1860 aaPredicted RBP22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 NPHS1O60500 1241 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 DKK1O94907 266 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 MLYCDO95822 493 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 SERPINE1P05121 402 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 C1GALT1C1LP0DN25 315 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 CCR10P46092 362 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 SEPHS1P49903 392 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 CHIT1Q13231 466 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 XKR6Q5GH73 641 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 FCRL6Q6DN72 434 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 SLCO4C1Q6ZQN7 724 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 TRIM42Q8IWZ5 723 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 C19orf47Q8N9M1 422 aaKnown RBP22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 ABHD11Q8NFV4 315 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 ZUFSPQ96AP4 578 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 CNDP1Q96KN2 507 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 ANKMY1Q9P2S6 941 aa22.68■■□□□ 1.22
TSPAN4-203ENST00000397397 HEATR5BQ9P2D3 2071 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 PPP6CO00743 305 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 TOX3O15405 576 aaPredicted RBP22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 PRAMEF10O60809 474 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 ZBTB11O95625 1053 aaPredicted RBP22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 VARSP26640 1264 aaKnown RBP22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 ARL4DP49703 201 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 CLDN6P56747 220 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 LCP2Q13094 533 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 RCN2Q14257 317 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 CDCP2Q5VXM1 449 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 ATG9BQ674R7 924 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 ZNF425Q6IV72 752 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 B3GNT8Q7Z7M8 397 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 OR52B6Q8NGF0 335 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 OR6Y1Q8NGX8 325 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 TMEM74Q96NL1 305 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 PLCD4Q9BRC7 762 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 ZNF768Q9H5H4 540 aaKnown RBP22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 ACTR8Q9H981 624 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 SOHLH2Q9NX45 425 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 SEMA5BQ9P283 1151 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 KLK4Q9Y5K2 254 aa22.67■■□□□ 1.22
TSPAN4-203ENST00000397397 MAP3K7O43318 606 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms