RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 PEBP1P30086 187 aaKnown RBP22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 GRK3P35626 688 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 KRT6CP48668 564 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 CCR8P51685 355 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 DAB2P98082 770 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 ZNF33BQ06732 778 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 SF3A2Q15428 464 aaKnown RBP22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 LETMD1Q6P1Q0 360 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 SPESP1Q6UW49 350 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 ZNF761Q86XN6 746 aaPredicted RBP22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 METTL6Q8TCB7 284 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 AGR3Q8TD06 166 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 AIF1LQ9BQI0 150 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 FAM107BQ9H098 131 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 FAM86C1Q9NVL1 165 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 PNPOQ9NVS9 261 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 SPHK1Q9NYA1 384 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 MARCOQ9UEW3 520 aaPredicted RBP22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 SNX7Q9UNH6 387 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 PCDHGA11Q9Y5H2 935 aa22.71■■□□□ 1.23
TSPAN4-202ENST00000397396 EME2A4GXA9 379 aaPredicted RBP22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 KITP10721 976 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 CKMT1AP12532 417 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 CDH1P12830 882 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 UGT2B7P16662 529 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 PSMB5P28074 263 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 PRDX3P30048 256 aaKnown RBP22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 PPM1FP49593 454 aaPredicted RBP22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 DOC2AQ14183 400 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 PROX2Q3B8N5 592 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 ATG14Q6ZNE5 492 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 RNF165Q6ZSG1 346 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 CDYL2Q8N8U2 506 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 RSC1A1Q92681 617 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 CDK15Q96Q40 435 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 CD180Q99467 661 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 TMEM184CQ9NVA4 438 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 KLHL14Q9P2G3 628 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 EPHA6Q9UF33 1036 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 ZNF225Q9UK10 706 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 POMT2Q9UKY4 750 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 USH1CQ9Y6N9 552 aa22.7■■□□□ 1.22
TSPAN4-202ENST00000397396 A0A0J9YY10 115 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 PROB1E7EW31 1015 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 CAPN1P07384 714 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 ALOX15P16050 662 aaPredicted RBP22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 SERPINB1P30740 379 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 PHEXP78562 749 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 AASDHQ4L235 1098 aaPredicted RBP22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 CARFQ8N187 725 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 STON2Q8WXE9 905 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 CCT6BQ92526 530 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 CCDC74AQ96AQ1 378 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 ZDHHC12Q96GR4 267 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 OR2A14Q96R47 310 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 CCT8L2Q96SF2 557 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 NRTNQ99748 197 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 ELOVL6Q9H5J4 265 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 NPHS2Q9NP85 383 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 RNF11Q9Y3C5 154 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 RALGAPA1Q6GYQ0 2036 aa22.69■■□□□ 1.22
TSPAN4-202ENST00000397396 H0YIV9 168 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 TYRP1P17643 537 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 GSTM2P28161 218 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 ALDH4A1P30038 563 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 IFT88Q13099 833 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 SLBPQ14493 270 aaKnown RBP eCLIP22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 CLPPQ16740 277 aaPredicted RBP22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 CATSPEREQ5SY80 951 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 MED27Q6P2C8 311 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 PRR23CQ6ZRP0 262 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 SPATA21Q7Z572 469 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 DCBLD1Q8N8Z6 715 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 TWIST2Q8WVJ9 160 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 DPYSL5Q9BPU6 564 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 ZMYND15Q9H091 742 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 NT5DC2Q9H857 520 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 ADGRE2Q9UHX3 823 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 FIS1Q9Y3D6 152 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 KLK4Q9Y5K2 254 aa22.68■■□□□ 1.22
TSPAN4-202ENST00000397396 GPR179Q6PRD1 2367 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 KCNE1BA0A087WTH5 132 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 IGHV1OR21-1A0A087WYE8 117 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 LY6G6EA0A0G2JKS1 128 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 CDX4O14627 284 aaPredicted RBP22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 LDOC1O95751 146 aaPredicted RBP22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 REEP5Q00765 189 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 ZRSR2Q15696 482 aaKnown RBP22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 CPSF6Q16630 551 aaKnown RBP eCLIP22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 GKAP1Q5VSY0 366 aaPredicted RBP22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 CLEC6AQ6EIG7 209 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 ADCK2Q7Z695 626 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 SPRED1Q7Z699 444 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 FAM129CQ86XR2 697 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 PLXDC1Q8IUK5 500 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 TTLQ8NG68 377 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 OR4K1Q8NGD4 311 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 FLVCR1-AS1Q8TAF5 88 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 ZUFSPQ96AP4 578 aa22.67■■□□□ 1.22
TSPAN4-202ENST00000397396 SEC16BQ96JE7 1060 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms