RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ARHGEF17Q96PE2 2063 aaPredicted RBP14.43□□□□□ -0.1
CAPN3-207ENST00000397200 LMO7DNF2Z398 122 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 TRIM38O00635 465 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 OR7A17O14581 309 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 YY2O15391 372 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 EML2O95834 649 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 CHEK2O96017 543 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 F3P13726 295 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 SLC2A4P14672 509 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 XRCC1P18887 633 aaPredicted RBP14.43□□□□□ -0.1
CAPN3-207ENST00000397200 ME2P23368 584 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 ACADLP28330 430 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 CCT8P50990 548 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 ATXN3P54252 364 aaPredicted RBP14.43□□□□□ -0.1
CAPN3-207ENST00000397200 PSME3P61289 254 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 TRAF3Q13114 568 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 SP140Q13342 867 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 CLCA4Q14CN2 919 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 RBBP7Q16576 425 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 CAPRIN2Q6IMN6 1127 aaKnown RBP14.43□□□□□ -0.1
CAPN3-207ENST00000397200 LETMD1Q6P1Q0 360 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 UNC5DQ6UXZ4 953 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 UBE2R2Q712K3 238 aaPredicted RBP14.43□□□□□ -0.1
CAPN3-207ENST00000397200 DHDDSQ86SQ9 333 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 MIER2Q8N344 545 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 EFCAB3Q8N7B9 438 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 OR52B6Q8NGF0 335 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 ASB11Q8WXH4 323 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 TFGQ92734 400 aaPredicted RBP14.43□□□□□ -0.1
CAPN3-207ENST00000397200 ROPN1LQ96C74 230 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 TUBGCP3Q96CW5 907 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 INSM2Q96T92 566 aaPredicted RBP14.43□□□□□ -0.1
CAPN3-207ENST00000397200 TMEM79Q9BSE2 394 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 IL21RQ9HBE5 538 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 SLC52A3Q9NQ40 469 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 NCDNQ9UBB6 729 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 ASF1AQ9Y294 204 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 HCN4Q9Y3Q4 1203 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 TIMM22Q9Y584 194 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 CFAP20Q9Y6A4 193 aaKnown RBP14.43□□□□□ -0.1
CAPN3-207ENST00000397200 CSNK1G3Q9Y6M4 447 aa14.43□□□□□ -0.1
CAPN3-207ENST00000397200 A6NCN8 305 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 PABPN1LA6NDY0 278 aaKnown RBP14.42□□□□□ -0.1
CAPN3-207ENST00000397200 ACOT8O14734 319 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 MRASO14807 208 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 CASQ2O14958 399 aaPredicted RBP14.42□□□□□ -0.1
CAPN3-207ENST00000397200 SLC16A5O15375 505 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 PSIP1O75475 530 aaKnown RBP14.42□□□□□ -0.1
CAPN3-207ENST00000397200 CRCPO75575 148 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 BCAS2O75934 225 aaPredicted RBP14.42□□□□□ -0.1
CAPN3-207ENST00000397200 OR4F21O95013 312 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 CATP04040 527 aaKnown RBP14.42□□□□□ -0.1
CAPN3-207ENST00000397200 RPN2P04844 631 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 ZNF806P0C7X5 589 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 LINC00032P0C843 101 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 HGFP14210 728 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 CDKL1Q00532 357 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 GTF2H2Q13888 395 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 PHKG1Q16816 387 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 DEFB133Q30KQ1 61 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 SULT1C3Q6IMI6 304 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 GTF2H2CQ6P1K8 395 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 TTC23LQ6PF05 361 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 PAOXQ6QHF9 649 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 RASGRP3Q8IV61 690 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 PPFIBP2Q8ND30 876 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 SLC26A7Q8TE54 656 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 PYDC1Q8WXC3 89 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 DLG3Q92796 817 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 ESAMQ96AP7 390 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 RHBDF1Q96CC6 855 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 GPATCH1Q9BRR8 931 aaKnown RBP14.42□□□□□ -0.1
CAPN3-207ENST00000397200 IMP3Q9NV31 184 aaKnown RBP14.42□□□□□ -0.1
CAPN3-207ENST00000397200 SCHIP1Q9P0W5 487 aaPredicted RBP14.42□□□□□ -0.1
CAPN3-207ENST00000397200 GIMAP2Q9UG22 337 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 BCAP29Q9UHQ4 241 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 HEBP2Q9Y5Z4 205 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 DMDP11532 3685 aa14.42□□□□□ -0.1
CAPN3-207ENST00000397200 OR5K4A6NMS3 321 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 OR52A4PA6NMU1 304 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 B4DGG1 531 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 GFYI3L273 518 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 GIPC1O14908 333 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 OTCP00480 354 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 MTHFD1P11586 935 aaKnown RBP14.41□□□□□ -0.1
CAPN3-207ENST00000397200 CYP2A7P20853 494 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 MAP4P27816 1152 aaKnown RBP14.41□□□□□ -0.1
CAPN3-207ENST00000397200 ERVK-8P63133 956 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 KRT33BQ14525 404 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 RPE65Q16518 533 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 MUM1Q2TAK8 710 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 PDCD4Q53EL6 469 aaKnown RBP14.41□□□□□ -0.1
CAPN3-207ENST00000397200 ZFP1Q6P2D0 407 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 IYDQ6PHW0 289 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 HOMEZQ8IX15 550 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 KBTBD2Q8IY47 623 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 SLC25A45Q8N413 288 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 MINDY1Q8N5J2 469 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 OR2I1PQ8NGU4 316 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 OR2T11Q8NH01 316 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms