RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 ZNF547Q8IVP9 402 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 SRRM1Q8IYB3 904 aaKnown RBP13.19□□□□□ -0.3
SEC13-205ENST00000397101 ACVR1CQ8NER5 493 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 ELMO1Q92556 727 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 MR1Q95460 341 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 CXorf40BQ96DE9 158 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 PGM2Q96G03 612 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 BIRC8Q96P09 236 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 SMC6Q96SB8 1091 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 GPR21Q99679 349 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 CCM2Q9BSQ5 444 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 GPAMQ9HCL2 828 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 SNX15Q9NRS6 342 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 TSR3Q9UJK0 312 aaKnown RBP13.19□□□□□ -0.3
SEC13-205ENST00000397101 TCFL5Q9UL49 500 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 SNX7Q9UNH6 387 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 ENTPD4Q9Y227 616 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 POLEQ07864 2286 aa13.19□□□□□ -0.3
SEC13-205ENST00000397101 OR52A4PA6NMU1 304 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 FOXO6A8MYZ6 492 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 KPNA5O15131 536 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 POP7O75817 140 aaKnown RBP13.18□□□□□ -0.3
SEC13-205ENST00000397101 APOA4P06727 396 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 EBLN1P0CF75 366 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 FDXRP22570 491 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 SKIV2L2P42285 1042 aaKnown RBP13.18□□□□□ -0.3
SEC13-205ENST00000397101 HALP42357 657 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 DMPKQ09013 629 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 BOP1Q14137 746 aaKnown RBP13.18□□□□□ -0.3
SEC13-205ENST00000397101 SEPT7Q16181 437 aaKnown RBP13.18□□□□□ -0.3
SEC13-205ENST00000397101 TTLL9Q3SXZ7 439 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 BCL7AQ4VC05 210 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 CRB2Q5IJ48 1285 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 AGBL2Q5U5Z8 902 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 IGFL3Q6UXB1 125 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 NAPRTQ6XQN6 538 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 TIFABQ6ZNK6 161 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 C11orf96Q7Z7L8 435 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 TBC1D1Q86TI0 1168 aaPredicted RBP13.18□□□□□ -0.3
SEC13-205ENST00000397101 DSELQ8IZU8 1212 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 SKA2Q8WVK7 121 aaPredicted RBP13.18□□□□□ -0.3
SEC13-205ENST00000397101 KCNJ9Q92806 393 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 INPP5DQ92835 1189 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 ZNF501Q96CX3 271 aaPredicted RBP13.18□□□□□ -0.3
SEC13-205ENST00000397101 C19orf60Q96EN9 201 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 CABS1Q96KC9 395 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 PKNOX2Q96KN3 472 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 MAP3K3Q99759 626 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 OLFM1Q99784 485 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 MFRPQ9BY79 579 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 CHST8Q9H2A9 424 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 SYTL2Q9HCH5 934 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 PCMTD2Q9NV79 361 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 ASF1BQ9NVP2 202 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 LUZP4Q9P127 313 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 MAP10Q9P2G4 905 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 B3GNT3Q9Y2A9 372 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 DNAJC16Q9Y2G8 782 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 ACOT9Q9Y305 439 aa13.18□□□□□ -0.3
SEC13-205ENST00000397101 A0A087X1B8 175 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 A0A096LPK6 155 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 HMX2A2RU54 273 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 MEN1O00255 615 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 ZBTB11O95625 1053 aaPredicted RBP13.17□□□□□ -0.3
SEC13-205ENST00000397101 C2P06681 752 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 MSL3P1P0C860 447 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 PYGBP11216 843 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 KRT4P19013 534 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 RPL10P27635 214 aaKnown RBP13.17□□□□□ -0.3
SEC13-205ENST00000397101 RORAP35398 523 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 PRLHRP49683 370 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 ARL4DP49703 201 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 RGS4P49798 205 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 PGGT1BP53609 377 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 MAGOHP61326 146 aaKnown RBP13.17□□□□□ -0.3
SEC13-205ENST00000397101 PPP1CAP62136 330 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 HSPA14Q0VDF9 509 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 ELOAQ14241 798 aaKnown RBP13.17□□□□□ -0.3
SEC13-205ENST00000397101 ZNF460Q14592 562 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 KCNAB1Q14722 419 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 PLEKHN1Q494U1 663 aaPredicted RBP13.17□□□□□ -0.3
SEC13-205ENST00000397101 PLEKHS1Q5SXH7 462 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 AMZ2Q86W34 360 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 TMEM126BQ8IUX1 230 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 CEP97Q8IW35 865 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 CFAP206Q8IYR0 622 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 C4orf33Q8N1A6 199 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 ZBTB2Q8N680 514 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 ENDOVQ8N8Q3 282 aaKnown RBP13.17□□□□□ -0.3
SEC13-205ENST00000397101 SLC38A9Q8NBW4 561 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 LKAAEAR1Q8TD35 194 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 ZFPM2Q8WW38 1151 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 ARL8AQ96BM9 186 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 ATP6V1G3Q96LB4 118 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 IP6K3Q96PC2 410 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 MCMBPQ9BTE3 642 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 IQCGQ9H095 443 aaKnown RBP13.17□□□□□ -0.3
SEC13-205ENST00000397101 KCNK9Q9NPC2 374 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 SENP1Q9P0U3 644 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 GALPQ9UBC7 116 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms