RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 HOXD4P09016 255 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-202ENST00000396629 CD46P15529 392 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 MSX1P28360 303 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 EEF1DP29692 281 aaKnown RBP7.98□□□□□ -1.13
SCFD1-202ENST00000396629 CCR7P32248 378 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 CD96P40200 585 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 PPP2R2AP63151 447 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 HSF1Q00613 529 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 FOLH1Q04609 750 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 TYRO3Q06418 890 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 FOXD4Q12950 439 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-202ENST00000396629 ASTE1Q2TB18 679 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-202ENST00000396629 ANKRD20A2Q5SQ80 823 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 ANKRD20A1Q5TYW2 823 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 ANKRD20A3Q5VUR7 823 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 PLAG1Q6DJT9 500 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 C3P1Q6ZMU1 363 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 CLEC17AQ6ZS10 378 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 TMEM200AQ86VY9 491 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 ZC3H7AQ8IWR0 971 aaKnown RBP7.98□□□□□ -1.13
SCFD1-202ENST00000396629 TMEM178AQ8NBL3 297 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 LILRB4Q8NHJ6 448 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 HMGCLL1Q8TB92 370 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 HAUS1Q96CS2 278 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 IQCDQ96DY2 449 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 CABS1Q96KC9 395 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 NPAS2Q99743 824 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 YIPF2Q9BWQ6 316 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 RAB11FIP5Q9BXF6 653 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 NAT10Q9H0A0 1025 aaKnown RBP7.98□□□□□ -1.13
SCFD1-202ENST00000396629 C10orf88Q9H8K7 445 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 SLC39A10Q9ULF5 831 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 ACANP16112 2415 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 OR2A25A4D2G3 310 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 H0YGG7 62 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 NRP2O60462 931 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 TOXO94900 526 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 CYC1P08574 325 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 TNNT1P13805 278 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 PSMB5P28074 263 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 FOXN2P32314 431 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 CSE1LP55060 971 aaKnown RBP7.98□□□□□ -1.13
SCFD1-202ENST00000396629 ARF3P61204 181 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-202ENST00000396629 OR1C1Q15619 314 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 MEP1AQ16819 746 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 FCRLBQ6BAA4 426 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 MARVELD2Q8N4S9 558 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 ARHGEF39Q8N4T4 335 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 FAM98AQ8NCA5 519 aaKnown RBP7.98□□□□□ -1.13
SCFD1-202ENST00000396629 OR2L3Q8NG85 312 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 MIPEPQ99797 713 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 ZFYVE21Q9BQ24 234 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 UTP23Q9BRU9 249 aaKnown RBP7.98□□□□□ -1.13
SCFD1-202ENST00000396629 CCM2LQ9NUG4 571 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-202ENST00000396629 LUC7L2Q9Y383 392 aaKnown RBP7.98□□□□□ -1.13
SCFD1-202ENST00000396629 HYOU1Q9Y4L1 999 aa7.98□□□□□ -1.13
SCFD1-202ENST00000396629 A0A1W2PPV9 198 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 H7C0C1 242 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 CDK2AP1O14519 115 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 PSTPIP1O43586 416 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 FOXS1O43638 330 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 SEC24DO94855 1032 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-202ENST00000396629 SERPINC1P01008 464 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 SP1P08047 785 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 C8orf89P0DMQ9 161 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 ERVK-10P10266 1014 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 COMTP21964 271 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 CHRNB4P30926 498 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 ATP5OP48047 213 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 SPARCL1Q14515 664 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 RNFT1Q5M7Z0 435 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 GARNL3Q5VVW2 1013 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 TMEM211Q6ICI0 200 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 SPINK14Q6IE38 97 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 SLC25A25Q6KCM7 469 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 GALNTL5Q7Z4T8 443 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 CPEB2Q7Z5Q1 589 aaKnown RBP7.97□□□□□ -1.13
SCFD1-202ENST00000396629 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-202ENST00000396629 CRLF3Q8IUI8 442 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 RHOT2Q8IXI1 618 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 OR2A1Q8NGT9 310 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 CFAP61Q8NHU2 1237 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 FAM57AQ8TBR7 257 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 ASZ1Q8WWH4 475 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 HDAC10Q969S8 669 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 MMABQ96EY8 250 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-202ENST00000396629 PPP1R2P1Q96PQ5 205 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 OLFM1Q99784 485 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 CARD6Q9BX69 1037 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 KCNK13Q9HB14 408 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 SLC24A3Q9HC58 644 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 RUVBL1Q9Y265 456 aaKnown RBP7.97□□□□□ -1.13
SCFD1-202ENST00000396629 HRH3Q9Y5N1 445 aa7.97□□□□□ -1.13
SCFD1-202ENST00000396629 MAP1AP78559 2803 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-202ENST00000396629 NKX2-6A6NCS4 301 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 MROH6A6NGR9 719 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 OR51F1A6NGY5 319 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 F8W8V4 182 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 OR1I1O60431 355 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 NEURL1O76050 574 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms