RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CCDC138Q96M89 665 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 MBOAT4Q96T53 435 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 OSBPL10Q9BXB5 764 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 TOR3AQ9H497 397 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 VPS29Q9UBQ0 182 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 NUP210Q8TEM1 1887 aaPredicted RBP16.04■□□□□ 0.16
TRIM39-205ENST00000396551 YY2O15391 372 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 NOBOXO60393 691 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 TRMUO75648 421 aaKnown RBP16.04■□□□□ 0.16
TRIM39-205ENST00000396551 SLC16A8O95907 504 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 SRPRAP08240 638 aaKnown RBP16.04■□□□□ 0.16
TRIM39-205ENST00000396551 HNRNPFP52597 415 aaKnown RBP16.04■□□□□ 0.16
TRIM39-205ENST00000396551 PPP2R2BQ00005 443 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 CES5AQ6NT32 575 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 RTL10Q7L3V2 364 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 LRIG1Q96JA1 1093 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 RAD9AQ99638 391 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 MAGIXQ9H6Y5 334 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 SOD1P00441 154 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 PRPS1L1P21108 318 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 VASPP50552 380 aaPredicted RBP16.03■□□□□ 0.16
TRIM39-205ENST00000396551 GRHL2Q6ISB3 625 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 CHST15Q7LFX5 561 aaPredicted RBP16.03■□□□□ 0.16
TRIM39-205ENST00000396551 GPR141Q7Z602 305 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 ZNF707Q96C28 371 aaPredicted RBP16.03■□□□□ 0.16
TRIM39-205ENST00000396551 KPNA3O00505 521 aaPredicted RBP16.03■□□□□ 0.16
TRIM39-205ENST00000396551 XYLBO75191 536 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 ADH5P11766 374 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 DUOXA1Q1HG43 343 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 ZBED5Q49AG3 693 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 CCNYL2Q5T2Q4 361 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 CHPFQ8IZ52 775 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 OR56A3Q8NH54 315 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 HCAR2Q8TDS4 363 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 NXPE3Q969Y0 559 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 COQ10AQ96MF6 247 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 IFT80Q9P2H3 777 aaPredicted RBP16.03■□□□□ 0.16
TRIM39-205ENST00000396551 BTBD3Q9Y2F9 522 aa16.03■□□□□ 0.16
TRIM39-205ENST00000396551 H0YIV9 168 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 B4GAT1O43505 415 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 CATP04040 527 aaKnown RBP16.02■□□□□ 0.16
TRIM39-205ENST00000396551 HNRNPA1P09651 372 aaKnown RBP eCLIP16.02■□□□□ 0.16
TRIM39-205ENST00000396551 RAE1P78406 368 aaKnown RBP16.02■□□□□ 0.16
TRIM39-205ENST00000396551 ZNF33BQ06732 778 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 PMS2P3Q13401 168 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 ANKRD26P1Q6NSI1 321 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 TRIM74Q86UV6 250 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 NLRP8Q86W28 1048 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 PYURFQ96I23 114 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 AMBRA1Q9C0C7 1298 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 USE1Q9NZ43 259 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 PCM1Q15154 2024 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 FPGTO14772 594 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 TLL1O43897 1013 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 SH3BGRLO75368 114 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 IL1RNP18510 177 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 TRPC1P48995 793 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 ERAP2Q6P179 960 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 SPESP1Q6UW49 350 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 XKR5Q6UX68 686 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 GPR155Q7Z3F1 870 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 CLECL1Q8IZS7 167 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 SVOPLQ8N434 492 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 PJA1Q8NG27 643 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 ATL1Q8WXF7 558 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 DTD2Q96FN9 168 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 YTHDF1Q9BYJ9 559 aaKnown RBP16.02■□□□□ 0.16
TRIM39-205ENST00000396551 SGK2Q9HBY8 427 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 FAM118AQ9NWS6 357 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 VNN3Q9NY84 501 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 EBF1Q9UH73 591 aa16.02■□□□□ 0.16
TRIM39-205ENST00000396551 MUC22E2RYF6 1773 aaPredicted RBP16.02■□□□□ 0.16
TRIM39-205ENST00000396551 MAGEB17A8MXT2 336 aa16.02■□□□□ 0.15
TRIM39-205ENST00000396551 PRRT4C9JH25 899 aa16.02■□□□□ 0.15
TRIM39-205ENST00000396551 K7ESM1 405 aa16.02■□□□□ 0.15
TRIM39-205ENST00000396551 GNGT2O14610 69 aa16.02■□□□□ 0.15
TRIM39-205ENST00000396551 SLC9A3R1O14745 358 aaPredicted RBP16.02■□□□□ 0.15
TRIM39-205ENST00000396551 PIGAP37287 484 aa16.02■□□□□ 0.15
TRIM39-205ENST00000396551 DCTP40126 519 aa16.02■□□□□ 0.15
TRIM39-205ENST00000396551 PCDH1Q08174 1060 aa16.02■□□□□ 0.15
TRIM39-205ENST00000396551 CLVS1Q8IUQ0 354 aaPredicted RBP16.02■□□□□ 0.15
TRIM39-205ENST00000396551 NRSN1Q8IZ57 195 aa16.02■□□□□ 0.15
TRIM39-205ENST00000396551 ZCCHC7Q8N3Z6 543 aaKnown RBP16.02■□□□□ 0.15
TRIM39-205ENST00000396551 CDC26Q8NHZ8 85 aa16.02■□□□□ 0.15
TRIM39-205ENST00000396551 BADQ92934 168 aa16.02■□□□□ 0.15
TRIM39-205ENST00000396551 HIC2Q96JB3 615 aa16.02■□□□□ 0.15
TRIM39-205ENST00000396551 RUVBL1Q9Y265 456 aaKnown RBP16.02■□□□□ 0.15
TRIM39-205ENST00000396551 PRMT3O60678 531 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 LILRB5O75023 590 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 HLA-EP13747 358 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 COX7A2P14406 83 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 PCSK2P16519 638 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 ENGP17813 658 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 PRKACGP22612 351 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 POLR2IP36954 125 aaKnown RBP16.01■□□□□ 0.15
TRIM39-205ENST00000396551 HNF4AP41235 474 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 HLCSP50747 726 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 SRSF11Q05519 484 aaKnown RBP16.01■□□□□ 0.15
TRIM39-205ENST00000396551 DPY19L1Q2PZI1 675 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 TMEM240Q5SV17 173 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms