RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 SLIRPQ9GZT3 109 aaKnown RBP15.25■□□□□ 0.03
HOXA3-202ENST00000396352 PCDH12Q9NPG4 1184 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 GIN1Q9NXP7 522 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 MBD1Q9UIS9 605 aaPredicted RBP15.25■□□□□ 0.03
HOXA3-202ENST00000396352 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.24■□□□□ 0.03
HOXA3-202ENST00000396352 KRT87PA6NCN2 255 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 TTC34A8MYJ7 566 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 SOCS5O75159 536 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 ZNF821O75541 412 aaPredicted RBP15.24■□□□□ 0.03
HOXA3-202ENST00000396352 GPX2P18283 190 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 AOAHP28039 575 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 KDELR2P33947 212 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 TGFBR1P36897 503 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 SMAD3P84022 425 aaKnown RBP15.24■□□□□ 0.03
HOXA3-202ENST00000396352 UGT8Q16880 541 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 KIAA1614Q5VZ46 1190 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 NOXRED1Q6NXP6 359 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 CRIPAKQ8N1N5 446 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 MINDY2Q8NBR6 621 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 TET1Q8NFU7 2136 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 APH1BQ8WW43 257 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 RPL3LQ92901 407 aaKnown RBP15.24■□□□□ 0.03
HOXA3-202ENST00000396352 HSH2DQ96JZ2 352 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 VN1R3Q9BXE9 311 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 EBPLQ9BY08 206 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 KIAA1671Q9BY89 1806 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 OBSL1O75147 1896 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 EVPLLA8MZ36 301 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 FPGTO14772 594 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 FAM20BO75063 409 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 EFEMP2O95967 443 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 GRK3P35626 688 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 TRPC1P48995 793 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 ST13P50502 369 aaKnown RBP15.24■□□□□ 0.03
HOXA3-202ENST00000396352 MVKQ03426 396 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 TCTN1Q2MV58 587 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 PTCHD3Q3KNS1 767 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 IQCCQ4KMZ1 466 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 FAHD1Q6P587 224 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 PRSS48Q7RTY5 328 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 ADCK1Q86TW2 530 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 PANX1Q96RD7 426 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 PITX2Q99697 317 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 DPH2Q9BQC3 489 aaPredicted RBP15.24■□□□□ 0.03
HOXA3-202ENST00000396352 TMEM175Q9BSA9 504 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 SLC12A9Q9BXP2 914 aa15.24■□□□□ 0.03
HOXA3-202ENST00000396352 OR2A25A4D2G3 310 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 SERPINB10P48595 397 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 CBLL1Q75N03 491 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 TMEM150AQ86TG1 271 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 HORMAD1Q86X24 394 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 SVOPQ8N4V2 548 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 RRAGCQ9HB90 399 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 KRT84Q9NSB2 600 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 ZDHHC3Q9NYG2 299 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 KLHL42Q9P2K6 505 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 RPS6KA6Q9UK32 745 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 SAMHD1Q9Y3Z3 626 aaKnown RBP15.23■□□□□ 0.03
HOXA3-202ENST00000396352 PCDHGA4Q9Y5G9 962 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 SERTM1A2A2V5 107 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 PCDHGA12O60330 932 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 MRPS14O60783 128 aaKnown RBP15.23■□□□□ 0.03
HOXA3-202ENST00000396352 PARNO95453 639 aaKnown RBP15.23■□□□□ 0.03
HOXA3-202ENST00000396352 ITGA1P56199 1179 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 PROX2Q3B8N5 592 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 RGMBQ6NW40 437 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 CRTC1Q6UUV9 634 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 EIF3MQ7L2H7 374 aaKnown RBP15.23■□□□□ 0.03
HOXA3-202ENST00000396352 VRK3Q8IV63 474 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 ASPSCR1Q9BZE9 553 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 CCNB1IP1Q9NPC3 277 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 RASSF1Q9NS23 344 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 OSGIN1Q9UJX0 560 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 LATS1O95835 1130 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 LCKP06239 509 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 EFNA1P20827 205 aaPredicted RBP15.23■□□□□ 0.03
HOXA3-202ENST00000396352 CSNK1DP48730 415 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 CRYBA2P53672 197 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 CREMQ03060 361 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 DNASE1L3Q13609 305 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 ATP13A5Q4VNC0 1218 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 CATSPEREQ5SY80 951 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 CYP2U1Q7Z449 544 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 NPAS4Q8IUM7 802 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 CPA6Q8N4T0 437 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 PAF1Q8N7H5 531 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 ASB11Q8WXH4 323 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 LGALS12Q96DT0 336 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 TRMT2BQ96GJ1 504 aaKnown RBP15.23■□□□□ 0.03
HOXA3-202ENST00000396352 LYSMD1Q96S90 227 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 C2orf49Q9BVC5 232 aaPredicted RBP15.23■□□□□ 0.03
HOXA3-202ENST00000396352 THUMPD1Q9NXG2 353 aaKnown RBP15.23■□□□□ 0.03
HOXA3-202ENST00000396352 TRIM17Q9Y577 477 aa15.23■□□□□ 0.03
HOXA3-202ENST00000396352 TBKBP1A7MCY6 615 aa15.22■□□□□ 0.03
HOXA3-202ENST00000396352 YY2O15391 372 aa15.22■□□□□ 0.03
HOXA3-202ENST00000396352 AQP9O43315 295 aa15.22■□□□□ 0.03
HOXA3-202ENST00000396352 SLC10A3P09131 477 aa15.22■□□□□ 0.03
HOXA3-202ENST00000396352 PRPS1L1P21108 318 aa15.22■□□□□ 0.03
HOXA3-202ENST00000396352 FUT4P22083 530 aa15.22■□□□□ 0.03
HOXA3-202ENST00000396352 FPGSQ05932 587 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms