RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ATL1Q8WXF7 558 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 TSACCQ96A04 125 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-204ENST00000395454 SPDL1Q96EA4 605 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 TEX37Q96LM6 180 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 CCDC138Q96M89 665 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 CARS2Q9HA77 564 aaKnown RBP14.63□□□□□ -0.07
SCAF11-204ENST00000395454 DNAJC11Q9NVH1 559 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 ZNHIT2Q9UHR6 403 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 PNMA8BQ9ULN7 279 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-204ENST00000395454 SUFUQ9UMX1 484 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 HCN4Q9Y3Q4 1203 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 PCYT1BQ9Y5K3 369 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-204ENST00000395454 TP53BP1Q12888 1972 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-204ENST00000395454 RALGAPA1Q6GYQ0 2036 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 ASPDHA6ND91 283 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 PABPN1LA6NDY0 278 aaKnown RBP14.62□□□□□ -0.07
SCAF11-204ENST00000395454 GPR89AB7ZAQ6 455 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 H3BNX3 289 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 ANGPT2O15123 496 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 EPN2O95208 641 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 NPPAP01160 153 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 KRT6AP02538 564 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 CATP04040 527 aaKnown RBP14.62□□□□□ -0.07
SCAF11-204ENST00000395454 FUCA1P04066 466 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 KRT6BP04259 564 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 GPR89BP0CG08 455 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 GNPDA1P46926 289 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 KRT6CP48668 564 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 NXPH1P58417 271 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 SRP54P61011 504 aaKnown RBP14.62□□□□□ -0.07
SCAF11-204ENST00000395454 MAD2L1Q13257 205 aaPredicted RBP14.62□□□□□ -0.07
SCAF11-204ENST00000395454 NR6A1Q15406 480 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 AP5B1Q2VPB7 878 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 SAMD4BQ5PRF9 694 aaKnown RBP14.62□□□□□ -0.07
SCAF11-204ENST00000395454 ICE2Q659A1 982 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 LAIR1Q6GTX8 287 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 ZFAND4Q86XD8 727 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 HID1Q8IV36 788 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 EFCAB3Q8N7B9 438 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 OR56A3Q8NH54 315 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 CEP76Q8TAP6 659 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 OR1E3Q8WZA6 343 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 KCNH6Q9H252 994 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 FSCN3Q9NQT6 498 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 PCDHGA5Q9Y5G8 931 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 IFRD1O00458 451 aaPredicted RBP14.62□□□□□ -0.07
SCAF11-204ENST00000395454 TNFRSF10CO14798 259 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 PRAMEF4O60810 478 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 ACPPP15309 386 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 PREPP48147 710 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 UFM1P61960 85 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 MS4A2Q01362 244 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 TRAP1Q12931 704 aaKnown RBP14.62□□□□□ -0.07
SCAF11-204ENST00000395454 TLR1Q15399 786 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 TCEA2Q15560 299 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 ALG11Q2TAA5 492 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 PLA2G4EQ3MJ16 856 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 VPS26BQ4G0F5 336 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 RFTN2Q52LD8 501 aaPredicted RBP14.62□□□□□ -0.07
SCAF11-204ENST00000395454 PRAMEF14Q5SWL7 426 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 PRAMEF9Q5VWM5 478 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 C11orf96Q7Z7L8 435 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 DPP10Q8N608 796 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 LILRA3Q8N6C8 439 aaPredicted RBP14.62□□□□□ -0.07
SCAF11-204ENST00000395454 SUMF1Q8NBK3 374 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 DPEP2Q9H4A9 486 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 SMOC1Q9H4F8 434 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 ACTR8Q9H981 624 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 STOX2Q9P2F5 926 aaPredicted RBP14.62□□□□□ -0.07
SCAF11-204ENST00000395454 GPSM3Q9Y4H4 160 aa14.62□□□□□ -0.07
SCAF11-204ENST00000395454 PRORSD1PA6NEY8 169 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 CFLARO15519 480 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 MAP3K7O43318 606 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 MAP4P27816 1152 aaKnown RBP14.61□□□□□ -0.07
SCAF11-204ENST00000395454 IL12AP29459 219 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 PBLDP30039 288 aaPredicted RBP14.61□□□□□ -0.07
SCAF11-204ENST00000395454 ARL1P40616 181 aaPredicted RBP14.61□□□□□ -0.07
SCAF11-204ENST00000395454 POLR2JP52435 117 aaKnown RBP14.61□□□□□ -0.07
SCAF11-204ENST00000395454 KCNK10P57789 538 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 EIF2B5Q13144 721 aaKnown RBP14.61□□□□□ -0.07
SCAF11-204ENST00000395454 PRKG2Q13237 762 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 FLOT2Q14254 428 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 TRIM25Q14258 630 aaKnown RBP14.61□□□□□ -0.07
SCAF11-204ENST00000395454 KIAA0040Q15053 153 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 ZFP1Q6P2D0 407 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 CYP20A1Q6UW02 462 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 RNF111Q6ZNA4 994 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 CHST15Q7LFX5 561 aaPredicted RBP14.61□□□□□ -0.07
SCAF11-204ENST00000395454 LRRTM4Q86VH4 590 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 OR2L2Q8NH16 312 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 HM13Q8TCT9 377 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 C1orf50Q9BV19 199 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 CAAP1Q9H8G2 361 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 RMI1Q9H9A7 625 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 KLF15Q9UIH9 416 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 ZNF490Q9ULM2 529 aaPredicted RBP14.61□□□□□ -0.07
SCAF11-204ENST00000395454 SNX11Q9Y5W9 270 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 CABIN1Q9Y6J0 2220 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 TMEM131Q92545 1883 aa14.61□□□□□ -0.07
SCAF11-204ENST00000395454 H3BM21 787 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms